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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=39)
VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1edm-a1-m1-cC 39 39 1.0000 1.0000 1.0000 3.66e-23 1edm-a1-m1-cB_1edm-a1-m1-cC
2 1edm-a1-m1-cB 39 39 1.0000 1.0000 1.0000 3.66e-23 1edm-a1-m1-cB_1edm-a1-m1-cC
3 1x7a-a2-m2-cL 97 35 0.7949 0.3196 0.8857 6.44e-17 1x7a-a2-m1-cL_1x7a-a2-m2-cL
4 1x7a-a2-m1-cL 97 35 0.7949 0.3196 0.8857 6.44e-17 1x7a-a2-m1-cL_1x7a-a2-m2-cL
5 4cud-a1-m2-cA 122 39 0.4872 0.1557 0.4872 3.33e-08 4cud-a1-m1-cA_4cud-a1-m2-cA
6 4cud-a1-m2-cA 122 39 0.4359 0.1393 0.4359 2.92e-06 4cud-a1-m1-cA_4cud-a1-m2-cA
7 4cud-a1-m2-cA 122 40 0.4103 0.1311 0.4000 0.001 4cud-a1-m1-cA_4cud-a1-m2-cA
8 4cud-a1-m1-cA 122 39 0.4872 0.1557 0.4872 3.33e-08 4cud-a1-m1-cA_4cud-a1-m2-cA
9 4cud-a1-m1-cA 122 39 0.4359 0.1393 0.4359 2.92e-06 4cud-a1-m1-cA_4cud-a1-m2-cA
10 4cud-a1-m1-cA 122 40 0.4103 0.1311 0.4000 0.001 4cud-a1-m1-cA_4cud-a1-m2-cA
11 4d0f-a1-m2-cA 125 39 0.4872 0.1520 0.4872 3.42e-08 4d0f-a1-m1-cA_4d0f-a1-m2-cA
12 4d0f-a1-m2-cA 125 39 0.4359 0.1360 0.4359 3.28e-06 4d0f-a1-m1-cA_4d0f-a1-m2-cA
13 4d0f-a1-m2-cA 125 40 0.4103 0.1280 0.4000 0.001 4d0f-a1-m1-cA_4d0f-a1-m2-cA
14 4d0f-a1-m1-cA 125 39 0.4872 0.1520 0.4872 3.42e-08 4d0f-a1-m1-cA_4d0f-a1-m2-cA
15 4d0f-a1-m1-cA 125 39 0.4359 0.1360 0.4359 3.28e-06 4d0f-a1-m1-cA_4d0f-a1-m2-cA
16 4d0f-a1-m1-cA 125 40 0.4103 0.1280 0.4000 0.001 4d0f-a1-m1-cA_4d0f-a1-m2-cA
17 4d90-a3-m1-cB 126 36 0.4359 0.1349 0.4722 1.81e-05 4d90-a3-m1-cB_4d90-a3-m1-cA
18 4d90-a3-m1-cB 126 40 0.4359 0.1349 0.4250 0.009 4d90-a3-m1-cB_4d90-a3-m1-cA
19 4d90-a3-m1-cB 126 32 0.3846 0.1190 0.4688 0.43 4d90-a3-m1-cB_4d90-a3-m1-cA
20 4d90-a3-m1-cA 127 36 0.4359 0.1339 0.4722 1.87e-05 4d90-a3-m1-cB_4d90-a3-m1-cA
21 4d90-a3-m1-cA 127 40 0.4359 0.1339 0.4250 0.009 4d90-a3-m1-cB_4d90-a3-m1-cA
22 4d90-a3-m1-cA 127 32 0.4103 0.1260 0.5000 0.042 4d90-a3-m1-cB_4d90-a3-m1-cA
23 5fm9-a1-m2-cA 154 36 0.4615 0.1169 0.5000 1.60e-04 5fm9-a1-m1-cA_5fm9-a1-m2-cA
24 5fm9-a1-m2-cA 154 34 0.4103 0.1039 0.4706 7.37e-04 5fm9-a1-m1-cA_5fm9-a1-m2-cA
25 5fm9-a1-m2-cA 154 34 0.4103 0.1039 0.4706 0.005 5fm9-a1-m1-cA_5fm9-a1-m2-cA
26 5fm9-a1-m2-cA 154 39 0.3846 0.0974 0.3846 0.028 5fm9-a1-m1-cA_5fm9-a1-m2-cA
27 5fm9-a1-m1-cA 154 36 0.4615 0.1169 0.5000 1.60e-04 5fm9-a1-m1-cA_5fm9-a1-m2-cA
28 5fm9-a1-m1-cA 154 34 0.4103 0.1039 0.4706 7.37e-04 5fm9-a1-m1-cA_5fm9-a1-m2-cA
29 5fm9-a1-m1-cA 154 34 0.4103 0.1039 0.4706 0.005 5fm9-a1-m1-cA_5fm9-a1-m2-cA
30 5fm9-a1-m1-cA 154 39 0.3846 0.0974 0.3846 0.028 5fm9-a1-m1-cA_5fm9-a1-m2-cA
31 5f19-a1-m1-cB 551 34 0.3846 0.0272 0.4412 0.018 5f19-a1-m1-cB_5f19-a1-m1-cA
32 5f19-a1-m1-cA 551 34 0.3846 0.0272 0.4412 0.018 5f19-a1-m1-cB_5f19-a1-m1-cA
33 2ygo-a1-m2-cA 174 28 0.3333 0.0747 0.4643 0.33 2ygo-a1-m1-cA_2ygo-a1-m2-cA
34 2ygo-a1-m1-cA 174 28 0.3333 0.0747 0.4643 0.33 2ygo-a1-m1-cA_2ygo-a1-m2-cA
35 8em4-a1-m1-cB 3818 42 0.4103 0.0042 0.3810 0.40 8em4-a1-m1-cA_8em4-a1-m1-cB
36 8em4-a1-m1-cB 3818 29 0.3333 0.0034 0.4483 4.1 8em4-a1-m1-cA_8em4-a1-m1-cB
37 8em4-a1-m1-cA 3818 42 0.4103 0.0042 0.3810 0.40 8em4-a1-m1-cA_8em4-a1-m1-cB
38 8em4-a1-m1-cA 3818 29 0.3333 0.0034 0.4483 4.1 8em4-a1-m1-cA_8em4-a1-m1-cB
39 8em7-a1-m1-cB 4378 42 0.4103 0.0037 0.3810 0.44 8em7-a1-m1-cA_8em7-a1-m1-cB
40 8em7-a1-m1-cB 4378 29 0.3333 0.0030 0.4483 4.5 8em7-a1-m1-cA_8em7-a1-m1-cB
41 8em7-a1-m1-cA 4378 42 0.4103 0.0037 0.3810 0.44 8em7-a1-m1-cA_8em7-a1-m1-cB
42 8em7-a1-m1-cA 4378 29 0.3333 0.0030 0.4483 4.5 8em7-a1-m1-cA_8em7-a1-m1-cB
43 2ygq-a1-m3-cA 241 31 0.3590 0.0581 0.4516 0.51 2ygq-a1-m2-cA_2ygq-a1-m3-cA
44 2ygq-a1-m3-cA 241 28 0.3333 0.0539 0.4643 2.2 2ygq-a1-m2-cA_2ygq-a1-m3-cA
45 2ygq-a1-m3-cA 241 28 0.3333 0.0539 0.4643 7.4 2ygq-a1-m2-cA_2ygq-a1-m3-cA
46 2ygq-a1-m2-cA 241 31 0.3590 0.0581 0.4516 0.51 2ygq-a1-m2-cA_2ygq-a1-m3-cA
47 2ygq-a1-m2-cA 241 28 0.3333 0.0539 0.4643 2.2 2ygq-a1-m2-cA_2ygq-a1-m3-cA
48 2ygq-a1-m2-cA 241 28 0.3333 0.0539 0.4643 7.4 2ygq-a1-m2-cA_2ygq-a1-m3-cA
49 6cxo-a3-m4-cA 465 30 0.3333 0.0280 0.4333 0.88 6cxo-a3-m3-cA_6cxo-a3-m4-cA
50 6cxo-a3-m3-cA 465 30 0.3333 0.0280 0.4333 0.88 6cxo-a3-m3-cA_6cxo-a3-m4-cA
51 8de6-a1-m1-cG 401 31 0.3333 0.0324 0.4194 1.8 8de6-a1-m1-cA_8de6-a1-m1-cG
52 8de6-a1-m1-cA 401 31 0.3333 0.0324 0.4194 1.8 8de6-a1-m1-cA_8de6-a1-m1-cG
53 1g1q-a1-m1-cD 160 34 0.3333 0.0813 0.3824 2.7 1g1q-a1-m1-cA_1g1q-a1-m1-cD, 1g1q-a1-m1-cC_1g1q-a1-m1-cD
54 1g1q-a1-m1-cA 160 34 0.3333 0.0813 0.3824 2.7 1g1q-a1-m1-cA_1g1q-a1-m1-cD
55 1g1q-a1-m1-cC 159 34 0.3333 0.0818 0.3824 2.7 1g1q-a1-m1-cC_1g1q-a1-m1-cD
56 1g1s-a1-m1-cB 157 34 0.3333 0.0828 0.3824 2.7 1g1s-a1-m1-cB_1g1s-a1-m1-cA
57 1g1s-a1-m1-cA 158 34 0.3333 0.0823 0.3824 2.7 1g1s-a1-m1-cB_1g1s-a1-m1-cA
58 6y6a-a8-m1-cl 235 21 0.2308 0.0383 0.4286 4.2 6y6a-a8-m1-cl_6y6a-a8-m1-cm
59 6y6a-a8-m1-cm 259 21 0.2308 0.0347 0.4286 4.7 6y6a-a8-m1-cl_6y6a-a8-m1-cm
60 7pfp-a1-m1-cA 563 37 0.3077 0.0213 0.3243 6.7 7pfp-a1-m1-cC_7pfp-a1-m1-cA
61 7e3s-a1-m1-cA 145 14 0.2308 0.0621 0.6429 8.1 7e3s-a1-m1-cA_7e3s-a1-m1-cB
62 7e3s-a1-m1-cB 155 14 0.2308 0.0581 0.6429 8.1 7e3s-a1-m1-cA_7e3s-a1-m1-cB
63 7pfp-a1-m1-cC 420 37 0.3077 0.0286 0.3243 8.4 7pfp-a1-m1-cC_7pfp-a1-m1-cA
64 3iys-a1-m9-cF 335 12 0.1795 0.0209 0.5833 9.8 3iys-a1-m8-cF_3iys-a1-m9-cF, 3iys-a1-m9-cF_3iys-a1-m8-cB, 3iys-a1-m9-cF_3iys-a1-m9-cB, 3iys-a1-m9-cF_3iys-a1-m9-cC
65 3iys-a1-m8-cF 335 12 0.1795 0.0209 0.5833 9.8 3iys-a1-m8-cF_3iys-a1-m9-cF
66 3iys-a1-m9-cE 337 12 0.1795 0.0208 0.5833 9.8 3iys-a1-m54-cD_3iys-a1-m9-cE, 3iys-a1-m54-cE_3iys-a1-m9-cE, 3iys-a1-m55-cA_3iys-a1-m9-cE
67 3iys-a1-m9-cC 337 12 0.1795 0.0208 0.5833 9.8 3iys-a1-m10-cB_3iys-a1-m9-cC, 3iys-a1-m9-cF_3iys-a1-m9-cC
68 3iys-a1-m9-cB 337 12 0.1795 0.0208 0.5833 9.8 3iys-a1-m9-cF_3iys-a1-m9-cB
69 3iys-a1-m8-cB 337 12 0.1795 0.0208 0.5833 9.8 3iys-a1-m9-cF_3iys-a1-m8-cB
70 3iys-a1-m55-cA 337 12 0.1795 0.0208 0.5833 9.8 3iys-a1-m55-cA_3iys-a1-m9-cE
71 3iys-a1-m54-cE 337 12 0.1795 0.0208 0.5833 9.8 3iys-a1-m54-cE_3iys-a1-m9-cE
72 3iys-a1-m10-cB 337 12 0.1795 0.0208 0.5833 9.8 3iys-a1-m10-cB_3iys-a1-m9-cC, 3iys-a1-m9-cD_3iys-a1-m10-cB

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Reference:
Jacob Schwartz et al.

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