Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=36)
VDIETLKQELLELKQRYEAQQKALAVLEQRVRQVED

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6fue-a2-m1-cE 36 36 1.0000 1.0000 1.0000 1.34e-17 6fue-a2-m1-cE_6fue-a2-m1-cF
2 6fue-a2-m1-cF 37 36 1.0000 0.9730 1.0000 1.53e-17 6fue-a2-m1-cE_6fue-a2-m1-cF
3 3o8j-a5-m1-cJ 362 25 0.3056 0.0304 0.4400 1.5 3o8j-a5-m1-cI_3o8j-a5-m1-cJ
4 3o8j-a5-m1-cI 362 25 0.3056 0.0304 0.4400 1.6 3o8j-a5-m1-cI_3o8j-a5-m1-cJ
5 3ukm-a2-m1-cD 252 30 0.3056 0.0437 0.3667 3.8 3ukm-a2-m1-cC_3ukm-a2-m1-cD
6 3ukm-a2-m1-cC 252 30 0.3056 0.0437 0.3667 3.8 3ukm-a2-m1-cC_3ukm-a2-m1-cD
7 3abh-a1-m1-cB 278 34 0.3889 0.0504 0.4118 4.1 3abh-a1-m1-cA_3abh-a1-m1-cB
8 3abh-a1-m1-cA 278 34 0.3889 0.0504 0.4118 4.1 3abh-a1-m1-cA_3abh-a1-m1-cB
9 7kog-a1-m1-cB 1077 16 0.2778 0.0093 0.6250 6.5 7kog-a1-m1-cA_7kog-a1-m1-cB
10 7kog-a1-m1-cA 1077 16 0.2778 0.0093 0.6250 6.5 7kog-a1-m1-cA_7kog-a1-m1-cB
11 6p7x-a1-m1-cB 476 18 0.2500 0.0189 0.5000 7.1 6p7x-a1-m1-cA_6p7x-a1-m1-cB
12 2yy0-a3-m3-cD 53 18 0.2778 0.1887 0.5556 7.7 2yy0-a3-m2-cA_2yy0-a3-m3-cD, 2yy0-a3-m2-cD_2yy0-a3-m3-cD, 2yy0-a3-m3-cC_2yy0-a3-m3-cD
13 2yy0-a3-m2-cD 53 18 0.2778 0.1887 0.5556 7.7 2yy0-a3-m2-cD_2yy0-a3-m3-cD
14 2yy0-a3-m3-cA 38 18 0.2778 0.2632 0.5556 7.7 2yy0-a3-m3-cC_2yy0-a3-m3-cA
15 2yy0-a3-m2-cA 38 18 0.2778 0.2632 0.5556 7.7 2yy0-a3-m2-cA_2yy0-a3-m3-cD
16 2yy0-a3-m3-cC 37 18 0.2778 0.2703 0.5556 8.2 2yy0-a3-m3-cC_2yy0-a3-m3-cA, 2yy0-a3-m3-cC_2yy0-a3-m3-cD
17 6jni-a2-m1-cD 145 24 0.2778 0.0690 0.4167 8.5 6jni-a2-m1-cC_6jni-a2-m1-cD
18 3kux-a3-m3-cA 343 26 0.2778 0.0292 0.3846 8.9 3kux-a3-m1-cA_3kux-a3-m3-cA
19 3kux-a3-m1-cA 343 26 0.2778 0.0292 0.3846 8.9 3kux-a3-m1-cA_3kux-a3-m3-cA
20 3kux-a2-m2-cA 343 26 0.2778 0.0292 0.3846 8.9 3kux-a2-m1-cA_3kux-a2-m2-cA
21 3kux-a2-m1-cA 343 26 0.2778 0.0292 0.3846 8.9 3kux-a2-m1-cA_3kux-a2-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600