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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
VDLAEVEKQILATPGVKSFHDLHIWALASLTVHVVNDTAVNPEMEVLPELKQMLADKFDI
THVTIQFEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6vd9-a2-m1-cD 69 69 1.0000 1.0000 1.0000 3.26e-45 6vd9-a2-m1-cD_6vd9-a2-m1-cB
2 6vd9-a2-m1-cB 73 73 1.0000 0.9452 0.9452 4.68e-43 6vd9-a2-m1-cD_6vd9-a2-m1-cB
3 7y5h-a1-m1-cB 300 72 0.3768 0.0867 0.3611 1.24e-06 7y5h-a1-m1-cA_7y5h-a1-m1-cB
4 7y5h-a1-m1-cA 300 72 0.3768 0.0867 0.3611 1.24e-06 7y5h-a1-m1-cA_7y5h-a1-m1-cB
5 6xpe-a1-m1-cB 277 72 0.3478 0.0866 0.3333 4.28e-04 6xpe-a1-m1-cA_6xpe-a1-m1-cB
6 6xpe-a1-m1-cA 277 72 0.3478 0.0866 0.3333 4.28e-04 6xpe-a1-m1-cA_6xpe-a1-m1-cB
7 8beg-a1-m1-cB 649 53 0.2609 0.0277 0.3396 1.1 8beg-a1-m1-cB_8beg-a1-m1-cA
8 8beg-a1-m1-cA 650 53 0.2609 0.0277 0.3396 1.1 8beg-a1-m1-cB_8beg-a1-m1-cA
9 3d6b-a1-m1-cB 365 26 0.1594 0.0301 0.4231 7.6 3d6b-a1-m1-cB_3d6b-a1-m1-cA, 3d6b-a1-m1-cB_3d6b-a1-m1-cD
10 3d6b-a1-m1-cD 372 26 0.1594 0.0296 0.4231 7.6 3d6b-a1-m1-cB_3d6b-a1-m1-cD
11 3d6b-a1-m1-cA 374 26 0.1594 0.0294 0.4231 7.6 3d6b-a1-m1-cB_3d6b-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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