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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=73)
VDLAEVEKQILATPGVKSFHDLHIWALTSGKASLTVHVVNDTAVNPEMEVLPELKQMLAD
KFDITHVTIQFEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6vd9-a2-m1-cB 73 73 1.0000 1.0000 1.0000 1.13e-48 6vd9-a2-m1-cD_6vd9-a2-m1-cB
2 6vd9-a2-m1-cD 69 73 0.9452 1.0000 0.9452 4.95e-43 6vd9-a2-m1-cD_6vd9-a2-m1-cB
3 7y5h-a1-m1-cB 300 72 0.3699 0.0900 0.3750 3.42e-09 7y5h-a1-m1-cA_7y5h-a1-m1-cB
4 7y5h-a1-m1-cA 300 72 0.3699 0.0900 0.3750 3.42e-09 7y5h-a1-m1-cA_7y5h-a1-m1-cB
5 6xpe-a1-m1-cB 277 72 0.3425 0.0903 0.3472 1.06e-06 6xpe-a1-m1-cA_6xpe-a1-m1-cB
6 6xpe-a1-m1-cA 277 72 0.3425 0.0903 0.3472 1.06e-06 6xpe-a1-m1-cA_6xpe-a1-m1-cB
7 3d6b-a1-m1-cD 372 27 0.1507 0.0296 0.4074 4.2 3d6b-a1-m1-cB_3d6b-a1-m1-cD
8 3d6b-a1-m1-cA 374 27 0.1507 0.0294 0.4074 4.2 3d6b-a1-m1-cB_3d6b-a1-m1-cA
9 3d6b-a1-m1-cB 365 27 0.1507 0.0301 0.4074 4.5 3d6b-a1-m1-cB_3d6b-a1-m1-cA, 3d6b-a1-m1-cB_3d6b-a1-m1-cD
10 4dk0-a2-m6-cA 321 31 0.1370 0.0312 0.3226 5.1 4dk0-a2-m2-cA_4dk0-a2-m6-cA
11 4dk0-a2-m2-cA 321 31 0.1370 0.0312 0.3226 5.1 4dk0-a2-m2-cA_4dk0-a2-m6-cA
12 4dk0-a1-m9-cA 321 31 0.1370 0.0312 0.3226 5.1 4dk0-a1-m2-cA_4dk0-a1-m9-cA, 4dk0-a1-m4-cA_4dk0-a1-m9-cA
13 4dk0-a1-m4-cA 321 31 0.1370 0.0312 0.3226 5.1 4dk0-a1-m4-cA_4dk0-a1-m9-cA
14 4dk0-a1-m2-cA 321 31 0.1370 0.0312 0.3226 5.1 4dk0-a1-m2-cA_4dk0-a1-m9-cA

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Reference:
Jacob Schwartz et al.

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