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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
VDLGLAAELSPILGDNEELQLAYVRDLFVFTSRLILIDQGVTGVSYHSIPYAIVHFQVET
AGTFDDAELLWISGQHEPLVELRGTDVVGIQTIARYALG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hsa-a1-m1-cD 100 99 1.0000 0.9900 1.0000 1.02e-67 3hsa-a1-m1-cC_3hsa-a1-m1-cD
2 3hsa-a1-m1-cC 99 99 1.0000 1.0000 1.0000 1.11e-67 3hsa-a1-m1-cC_3hsa-a1-m1-cD
3 3dcx-a1-m1-cD 110 105 0.7576 0.6818 0.7143 5.82e-35 3dcx-a1-m1-cE_3dcx-a1-m1-cD
4 3dcx-a1-m1-cE 100 102 0.6667 0.6600 0.6471 1.57e-27 3dcx-a1-m1-cE_3dcx-a1-m1-cD
5 6nwm-a1-m1-cB 162 77 0.1919 0.1173 0.2468 0.84 6nwm-a1-m1-cA_6nwm-a1-m1-cB
6 6nwm-a1-m1-cA 162 77 0.1919 0.1173 0.2468 0.84 6nwm-a1-m1-cA_6nwm-a1-m1-cB
7 5dyk-a2-m2-cA 809 53 0.2020 0.0247 0.3774 2.8 5dyk-a2-m1-cA_5dyk-a2-m2-cA
8 5dyk-a2-m1-cA 809 53 0.2020 0.0247 0.3774 2.8 5dyk-a2-m1-cA_5dyk-a2-m2-cA
9 7dde-a1-m1-cX 525 34 0.1212 0.0229 0.3529 7.1 7dde-a1-m1-cE_7dde-a1-m1-cX, 7dde-a1-m1-cV_7dde-a1-m1-cX
10 7dde-a1-m1-cV 525 34 0.1212 0.0229 0.3529 7.1 7dde-a1-m1-cV_7dde-a1-m1-cX
11 7dde-a1-m1-cE 525 34 0.1212 0.0229 0.3529 7.1 7dde-a1-m1-cE_7dde-a1-m1-cX
12 7zb5-a1-m1-cE 1447 46 0.1717 0.0117 0.3696 7.9 7zb5-a1-m1-cE_7zb5-a1-m1-cH
13 7zb5-a1-m1-cH 1449 46 0.1717 0.0117 0.3696 7.9 7zb5-a1-m1-cE_7zb5-a1-m1-cH
14 5a2x-a1-m1-cB 467 47 0.1616 0.0343 0.3404 9.0 5a2x-a1-m1-cB_5a2x-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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