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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=40)
VDLTVPWDDIEALLKNNFENDQAAVRQVMERLQKGWSLAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vej-a1-m1-cB 41 40 1.0000 0.9756 1.0000 7.47e-24 3vej-a1-m1-cA_3vej-a1-m1-cB
2 3vej-a1-m1-cA 40 40 1.0000 1.0000 1.0000 8.83e-24 3vej-a1-m1-cA_3vej-a1-m1-cB
3 3ea0-a1-m1-cA 237 34 0.2750 0.0464 0.3235 0.91 3ea0-a1-m1-cA_3ea0-a1-m1-cB
4 4uab-a1-m1-cB 308 37 0.3500 0.0455 0.3784 0.93 4uab-a1-m1-cB_4uab-a1-m1-cA
5 4uab-a1-m1-cA 309 37 0.3500 0.0453 0.3784 0.94 4uab-a1-m1-cB_4uab-a1-m1-cA
6 3ea0-a1-m1-cB 239 34 0.2750 0.0460 0.3235 0.95 3ea0-a1-m1-cA_3ea0-a1-m1-cB
7 7eku-a1-m1-cB 1498 26 0.2750 0.0073 0.4231 4.2 7eku-a1-m1-cB_7eku-a1-m1-cA
8 7eku-a1-m1-cA 1525 26 0.2750 0.0072 0.4231 4.5 7eku-a1-m1-cB_7eku-a1-m1-cA
9 7n7a-a1-m1-cA 269 18 0.2250 0.0335 0.5000 6.0 7n7a-a1-m1-cA_7n7a-a1-m1-cB
10 7n7a-a1-m1-cB 270 18 0.2250 0.0333 0.5000 6.0 7n7a-a1-m1-cA_7n7a-a1-m1-cB
11 3rfy-a2-m2-cA 356 28 0.2750 0.0309 0.3929 9.1 3rfy-a2-m1-cA_3rfy-a2-m2-cA
12 3rfy-a2-m1-cA 356 28 0.2750 0.0309 0.3929 9.1 3rfy-a2-m1-cA_3rfy-a2-m2-cA
13 3lg0-a2-m1-cC 385 13 0.2250 0.0234 0.6923 9.3 3lg0-a2-m1-cC_3lg0-a2-m1-cD
14 3lg0-a2-m1-cD 387 13 0.2250 0.0233 0.6923 9.3 3lg0-a2-m1-cC_3lg0-a2-m1-cD
15 6nz4-a1-m1-cB 451 23 0.2500 0.0222 0.4348 9.6 6nz4-a1-m1-cB_6nz4-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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