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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
VDVLLTVGKALLTTQDHHVIEFPTVLLPENVKAGSIIKMQSQNLEEEKKQRNHFKSIQAK
ILEKYGTH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4wjw-a1-m2-cA 68 68 1.0000 1.0000 1.0000 3.75e-45 4wjw-a1-m1-cA_4wjw-a1-m2-cA
2 4wjw-a1-m1-cA 68 68 1.0000 1.0000 1.0000 3.75e-45 4wjw-a1-m1-cA_4wjw-a1-m2-cA
3 4in3-a1-m1-cC 75 73 0.9853 0.8933 0.9178 3.69e-40 4in3-a1-m1-cC_4in3-a1-m1-cA
4 4in3-a1-m1-cA 80 73 0.9853 0.8375 0.9178 5.60e-40 4in3-a1-m1-cC_4in3-a1-m1-cA
5 4yg8-a2-m6-cA 276 28 0.4118 0.1014 1.0000 6.28e-13 4yg8-a2-m3-cA_4yg8-a2-m6-cA
6 4yg8-a2-m3-cA 276 28 0.4118 0.1014 1.0000 6.28e-13 4yg8-a2-m3-cA_4yg8-a2-m6-cA
7 7q5s-a1-m1-cL 1550 54 0.2500 0.0110 0.3148 0.40 7q5s-a1-m1-cA_7q5s-a1-m1-cL, 7q5s-a1-m1-cD_7q5s-a1-m1-cL, 7q5s-a1-m1-cF_7q5s-a1-m1-cL
8 7q5s-a1-m1-cF 1550 54 0.2500 0.0110 0.3148 0.40 7q5s-a1-m1-cF_7q5s-a1-m1-cL
9 7q5s-a1-m1-cD 1550 54 0.2500 0.0110 0.3148 0.40 7q5s-a1-m1-cD_7q5s-a1-m1-cL
10 7q5s-a1-m1-cA 1550 54 0.2500 0.0110 0.3148 0.40 7q5s-a1-m1-cA_7q5s-a1-m1-cL
11 3enm-a2-m1-cB 260 41 0.1618 0.0423 0.2683 7.2 3enm-a2-m1-cB_3enm-a2-m2-cD
12 3enm-a2-m2-cD 270 41 0.1618 0.0407 0.2683 7.6 3enm-a2-m1-cB_3enm-a2-m2-cD
13 7eku-a1-m1-cB 1498 41 0.1765 0.0080 0.2927 9.4 7eku-a1-m1-cB_7eku-a1-m1-cA
14 7eku-a1-m1-cA 1525 41 0.1765 0.0079 0.2927 9.4 7eku-a1-m1-cB_7eku-a1-m1-cA
15 7ejp-a1-m1-cB 1526 41 0.1765 0.0079 0.2927 9.5 7ejp-a1-m1-cA_7ejp-a1-m1-cB
16 7ejp-a1-m1-cA 1526 41 0.1765 0.0079 0.2927 9.5 7ejp-a1-m1-cA_7ejp-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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