Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=67)
VEDTLTMLVNATSRQNAAIEALENRLSTLESSLKPIQDMGKVISSLNRSCAEMVAKYDLL
EHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6gbq-a1-m1-cA 70 67 1.0000 0.9571 1.0000 1.71e-44 6gbq-a1-m1-cD_6gbq-a1-m1-cA
2 6gbq-a2-m1-cF 67 67 1.0000 1.0000 1.0000 1.92e-44 6gbq-a2-m1-cH_6gbq-a2-m1-cF
3 6gbq-a1-m1-cC 69 66 0.9851 0.9565 1.0000 1.08e-43 6gbq-a1-m1-cB_6gbq-a1-m1-cC
4 6gbq-a1-m1-cD 68 64 0.9552 0.9412 1.0000 4.84e-42 6gbq-a1-m1-cD_6gbq-a1-m1-cA
5 6gbr-a1-m1-cA 67 64 0.9552 0.9552 1.0000 4.86e-42 6gbr-a1-m1-cB_6gbr-a1-m1-cA
6 6gbq-a2-m1-cH 63 63 0.9403 1.0000 1.0000 2.79e-41 6gbq-a2-m1-cH_6gbq-a2-m1-cF
7 6gbr-a1-m1-cB 66 63 0.9403 0.9545 1.0000 3.13e-41 6gbr-a1-m1-cB_6gbr-a1-m1-cA
8 6gbq-a1-m1-cB 65 62 0.9254 0.9538 1.0000 2.30e-40 6gbq-a1-m1-cB_6gbq-a1-m1-cC
9 4z6k-a1-m1-cC 345 35 0.1642 0.0319 0.3143 0.071 4z6k-a1-m1-cD_4z6k-a1-m1-cC
10 4z6k-a1-m1-cA 345 35 0.1642 0.0319 0.3143 0.071 4z6k-a1-m1-cD_4z6k-a1-m1-cA
11 5vgc-a2-m2-cA 211 47 0.2537 0.0806 0.3617 0.87 5vgc-a2-m1-cA_5vgc-a2-m2-cA, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
12 5vgc-a2-m1-cA 211 47 0.2537 0.0806 0.3617 0.87 5vgc-a2-m1-cA_5vgc-a2-m2-cA
13 5vgc-a2-m2-cB 204 47 0.2537 0.0833 0.3617 0.89 5vgc-a2-m1-cB_5vgc-a2-m2-cB, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
14 5vgc-a2-m1-cB 204 47 0.2537 0.0833 0.3617 0.89 5vgc-a2-m1-cB_5vgc-a2-m2-cB
15 5c74-a1-m1-cA 211 11 0.1343 0.0427 0.8182 3.1 5c74-a1-m1-cB_5c74-a1-m1-cA
16 5c74-a1-m1-cB 144 54 0.2687 0.1250 0.3333 3.9 5c74-a1-m1-cB_5c74-a1-m1-cA
17 3h5a-a1-m1-cD 350 22 0.1493 0.0286 0.4545 5.5 3h5a-a1-m1-cD_3h5a-a1-m1-cA, 3h5a-a1-m1-cD_3h5a-a1-m1-cB
18 6iog-a1-m1-cB 374 26 0.1493 0.0267 0.3846 6.6 6iog-a1-m1-cA_6iog-a1-m1-cB
19 6z68-a1-m1-cA 363 30 0.1642 0.0303 0.3667 8.3 6z68-a1-m1-cB_6z68-a1-m1-cA
20 5m48-a1-m2-cA 108 63 0.2985 0.1852 0.3175 9.8 5m48-a1-m1-cA_5m48-a1-m2-cA
21 5m48-a1-m1-cA 108 63 0.2985 0.1852 0.3175 9.8 5m48-a1-m1-cA_5m48-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600