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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
VELRPLIGLTRGLPPTDLETITIDAIRTHRRLVEKADELFQALPETYKTGQACGGPQHIR
YIEASIEMHAQMSALNTLISILGFIPKV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1rfy-a2-m3-cB 88 88 1.0000 1.0000 1.0000 5.82e-61 1rfy-a2-m1-cB_1rfy-a2-m3-cB
2 1rfy-a2-m1-cB 88 88 1.0000 1.0000 1.0000 5.82e-61 1rfy-a2-m1-cB_1rfy-a2-m3-cB
3 2hjd-a2-m1-cD 90 87 0.6818 0.6667 0.6897 2.77e-41 2hjd-a2-m1-cC_2hjd-a2-m1-cD
4 2hjd-a2-m1-cC 89 87 0.6818 0.6742 0.6897 3.24e-41 2hjd-a2-m1-cC_2hjd-a2-m1-cD
5 7tj2-a1-m1-cF 347 50 0.1932 0.0490 0.3400 0.73 7tj2-a1-m1-cD_7tj2-a1-m1-cF
6 7rb0-a1-m1-cF 347 50 0.1932 0.0490 0.3400 0.73 7rb0-a1-m1-cE_7rb0-a1-m1-cF
7 7rb0-a1-m1-cE 347 50 0.1932 0.0490 0.3400 0.73 7rb0-a1-m1-cE_7rb0-a1-m1-cF
8 6wlc-a1-m3-cB 348 50 0.1932 0.0489 0.3400 0.73 6wlc-a1-m2-cA_6wlc-a1-m3-cB
9 6wlc-a1-m2-cA 348 50 0.1932 0.0489 0.3400 0.73 6wlc-a1-m2-cA_6wlc-a1-m3-cB
10 5sbf-a1-m3-cA 348 50 0.1932 0.0489 0.3400 0.73 5sbf-a1-m2-cA_5sbf-a1-m3-cA
11 5sbf-a1-m2-cA 348 50 0.1932 0.0489 0.3400 0.73 5sbf-a1-m2-cA_5sbf-a1-m3-cA
12 7tj2-a1-m1-cD 271 50 0.1932 0.0627 0.3400 0.80 7tj2-a1-m1-cD_7tj2-a1-m1-cF
13 5zb3-a1-m1-cB 280 34 0.1250 0.0393 0.3235 1.6 5zb3-a1-m1-cA_5zb3-a1-m1-cB
14 5zb3-a1-m1-cA 280 34 0.1250 0.0393 0.3235 1.6 5zb3-a1-m1-cA_5zb3-a1-m1-cB
15 2ozk-a1-m1-cD 296 50 0.1705 0.0507 0.3000 2.7 2ozk-a1-m1-cD_2ozk-a1-m1-cA, 2ozk-a1-m1-cD_2ozk-a1-m1-cB
16 2ozk-a1-m1-cB 305 50 0.1705 0.0492 0.3000 2.7 2ozk-a1-m1-cB_2ozk-a1-m1-cA, 2ozk-a1-m1-cD_2ozk-a1-m1-cB
17 2h85-a1-m6-cA 347 50 0.1705 0.0432 0.3000 2.8 2h85-a1-m2-cA_2h85-a1-m6-cA, 2h85-a1-m5-cA_2h85-a1-m6-cA
18 2h85-a1-m5-cA 347 50 0.1705 0.0432 0.3000 2.8 2h85-a1-m5-cA_2h85-a1-m6-cA
19 2h85-a1-m2-cA 347 50 0.1705 0.0432 0.3000 2.8 2h85-a1-m2-cA_2h85-a1-m6-cA
20 2ozk-a1-m1-cA 306 50 0.1705 0.0490 0.3000 2.8 2ozk-a1-m1-cB_2ozk-a1-m1-cA, 2ozk-a1-m1-cD_2ozk-a1-m1-cA
21 2dq0-a1-m1-cB 447 27 0.1136 0.0224 0.3704 3.2 2dq0-a1-m1-cA_2dq0-a1-m1-cB
22 2dq0-a1-m1-cA 447 27 0.1136 0.0224 0.3704 3.2 2dq0-a1-m1-cA_2dq0-a1-m1-cB
23 3sf6-a1-m4-cA 387 34 0.1250 0.0284 0.3235 5.2 3sf6-a1-m1-cA_3sf6-a1-m4-cA, 3sf6-a1-m2-cA_3sf6-a1-m4-cA
24 3sf6-a1-m2-cA 387 34 0.1250 0.0284 0.3235 5.2 3sf6-a1-m2-cA_3sf6-a1-m4-cA
25 3sf6-a1-m1-cA 387 34 0.1250 0.0284 0.3235 5.2 3sf6-a1-m1-cA_3sf6-a1-m4-cA
26 4ep1-a2-m5-cB 297 59 0.1932 0.0572 0.2881 5.4 4ep1-a2-m4-cB_4ep1-a2-m5-cB
27 4ep1-a2-m4-cB 297 59 0.1932 0.0572 0.2881 5.4 4ep1-a2-m4-cB_4ep1-a2-m5-cB
28 4zn6-a1-m1-cB 388 41 0.1591 0.0361 0.3415 5.5 4zn6-a1-m1-cB_4zn6-a1-m1-cA
29 4zn6-a1-m1-cA 392 41 0.1591 0.0357 0.3415 5.9 4zn6-a1-m1-cB_4zn6-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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