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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
VETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRC
HNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4xxe-a1-m1-cD 99 99 1.0000 1.0000 1.0000 4.70e-69 4xxe-a1-m1-cA_4xxe-a1-m1-cD
2 4xxe-a1-m1-cA 99 99 1.0000 1.0000 1.0000 4.70e-69 4xxe-a1-m1-cA_4xxe-a1-m1-cD
3 4xqq-a2-m1-cC 99 99 1.0000 1.0000 1.0000 4.70e-69 4xqq-a2-m1-cB_4xqq-a2-m1-cC
4 4xqq-a2-m1-cB 98 98 0.9899 1.0000 1.0000 2.39e-68 4xqq-a2-m1-cB_4xqq-a2-m1-cC
5 4cbv-a3-m1-cB 247 92 0.3030 0.1215 0.3261 5.98e-08 4cbv-a3-m1-cA_4cbv-a3-m1-cB
6 4cbv-a3-m1-cA 247 92 0.3030 0.1215 0.3261 5.98e-08 4cbv-a3-m1-cA_4cbv-a3-m1-cB
7 3d6w-a1-m4-cB 107 20 0.1111 0.1028 0.5500 0.27 3d6w-a1-m2-cA_3d6w-a1-m4-cB
8 3d6w-a1-m2-cA 107 20 0.1111 0.1028 0.5500 0.27 3d6w-a1-m2-cA_3d6w-a1-m4-cB
9 4g19-a2-m1-cD 251 38 0.1212 0.0478 0.3158 1.3 4g19-a2-m1-cC_4g19-a2-m1-cD
10 7nox-a1-m1-cA 520 28 0.0909 0.0173 0.3214 4.1 7nox-a1-m1-cA_7nox-a1-m1-cB
11 7nox-a1-m1-cB 520 28 0.0909 0.0173 0.3214 4.1 7nox-a1-m1-cA_7nox-a1-m1-cB
12 7o8c-a1-m1-cB 579 28 0.0909 0.0155 0.3214 4.6 7o8c-a1-m1-cB_7o8c-a1-m1-cA
13 7o8c-a1-m1-cA 582 28 0.0909 0.0155 0.3214 4.9 7o8c-a1-m1-cB_7o8c-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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