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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
VEVEHWNTLRLRIYIGENDKWEGRPLYKVIVEKLREMGIAGATVYRGIYGFGTDLPIIVE
VVDRGHNIEKVVNVIKPMIKDGMITVEPTIVLWVGTQEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2dcl-a1-m2-cA 99 99 1.0000 1.0000 1.0000 7.84e-67 2dcl-a1-m1-cA_2dcl-a1-m2-cA
2 2dcl-a1-m1-cA 99 99 1.0000 1.0000 1.0000 7.84e-67 2dcl-a1-m1-cA_2dcl-a1-m2-cA
3 2dcl-a1-m2-cB 98 98 0.9596 0.9694 0.9694 1.18e-61 2dcl-a1-m1-cB_2dcl-a1-m2-cB
4 2dcl-a1-m1-cB 98 98 0.9596 0.9694 0.9694 1.18e-61 2dcl-a1-m1-cB_2dcl-a1-m2-cB
5 1o51-a1-m3-cA 86 75 0.3434 0.3953 0.4533 3.36e-13 1o51-a1-m2-cA_1o51-a1-m3-cA
6 1o51-a1-m2-cA 86 75 0.3434 0.3953 0.4533 3.36e-13 1o51-a1-m2-cA_1o51-a1-m3-cA
7 8e2l-a1-m1-cA 460 77 0.1515 0.0326 0.1948 2.9 8e2l-a1-m1-cF_8e2l-a1-m1-cA
8 8e2l-a1-m1-cD 461 77 0.1515 0.0325 0.1948 2.9 8e2l-a1-m1-cC_8e2l-a1-m1-cD
9 8e2l-a1-m1-cC 461 77 0.1515 0.0325 0.1948 2.9 8e2l-a1-m1-cC_8e2l-a1-m1-cD
10 2eg2-a2-m9-cA 95 44 0.1818 0.1895 0.4091 3.6 2eg2-a2-m5-cA_2eg2-a2-m9-cA, 2eg2-a2-m6-cA_2eg2-a2-m9-cA
11 2eg2-a2-m6-cA 95 44 0.1818 0.1895 0.4091 3.6 2eg2-a2-m6-cA_2eg2-a2-m9-cA
12 2eg2-a2-m5-cA 95 44 0.1818 0.1895 0.4091 3.6 2eg2-a2-m5-cA_2eg2-a2-m9-cA
13 3gb0-a1-m2-cA 363 84 0.2424 0.0661 0.2857 5.7 3gb0-a1-m1-cA_3gb0-a1-m2-cA
14 3gb0-a1-m1-cA 363 84 0.2424 0.0661 0.2857 5.7 3gb0-a1-m1-cA_3gb0-a1-m2-cA
15 3lio-a1-m1-cB 192 48 0.1212 0.0625 0.2500 8.9 3lio-a1-m1-cA_3lio-a1-m1-cB
16 3lio-a1-m1-cA 192 48 0.1212 0.0625 0.2500 8.9 3lio-a1-m1-cA_3lio-a1-m1-cB
17 8fbd-a1-m1-cD 487 23 0.1010 0.0205 0.4348 9.7 8fbd-a1-m1-cB_8fbd-a1-m1-cD
18 8fbd-a1-m1-cB 487 23 0.1010 0.0205 0.4348 9.7 8fbd-a1-m1-cB_8fbd-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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