Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=66)
VGSEVSDKRTCVSLTTQRLPVSRIKTYTITEGSLRCVIFITKRGLKVCCDPQATWVRDVV
RSMDRK

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2n54-a1-m1-cB 66 66 1.0000 1.0000 1.0000 1.46e-42 2n54-a1-m1-cA_2n54-a1-m1-cB
2 2n54-a1-m1-cA 66 66 1.0000 1.0000 1.0000 1.46e-42 2n54-a1-m1-cA_2n54-a1-m1-cB
3 2jp1-a1-m1-cB 60 60 0.8788 0.9667 0.9667 2.39e-36 2jp1-a1-m1-cA_2jp1-a1-m1-cB
4 2jp1-a1-m1-cA 60 60 0.8788 0.9667 0.9667 2.39e-36 2jp1-a1-m1-cA_2jp1-a1-m1-cB
5 7s5a-a1-m1-cA 73 60 0.3485 0.3151 0.3833 3.42e-09 7s5a-a1-m1-cA_7s5a-a1-m1-cB
6 7s5a-a1-m1-cB 76 60 0.3485 0.3026 0.3833 3.66e-09 7s5a-a1-m1-cA_7s5a-a1-m1-cB
7 1esr-a1-m2-cA 75 60 0.3485 0.3067 0.3833 3.78e-09 1esr-a1-m1-cA_1esr-a1-m2-cA
8 1esr-a1-m1-cA 75 60 0.3485 0.3067 0.3833 3.78e-09 1esr-a1-m1-cA_1esr-a1-m2-cA
9 2q8r-a2-m1-cG 63 55 0.3333 0.3492 0.4000 1.50e-08 2q8r-a2-m1-cF_2q8r-a2-m1-cG
10 2q8r-a2-m1-cF 63 55 0.3333 0.3492 0.4000 1.50e-08 2q8r-a2-m1-cF_2q8r-a2-m1-cG
11 2vxw-a1-m1-cD 62 56 0.2879 0.3065 0.3393 2.27e-08 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
12 2vxw-a1-m1-cB 69 56 0.2879 0.2754 0.3393 2.31e-08 2vxw-a1-m1-cD_2vxw-a1-m1-cB
13 2vxw-a1-m1-cA 69 56 0.2879 0.2754 0.3393 2.31e-08 2vxw-a1-m1-cD_2vxw-a1-m1-cA
14 1hrj-a1-m1-cB 68 56 0.2879 0.2794 0.3393 2.69e-08 1hrj-a1-m1-cA_1hrj-a1-m1-cB
15 1hrj-a1-m1-cA 68 56 0.2879 0.2794 0.3393 2.69e-08 1hrj-a1-m1-cA_1hrj-a1-m1-cB
16 2l9h-a1-m1-cC 67 56 0.2879 0.2836 0.3393 2.87e-08 2l9h-a1-m1-cA_2l9h-a1-m1-cC
17 2l9h-a1-m1-cA 67 56 0.2879 0.2836 0.3393 2.87e-08 2l9h-a1-m1-cA_2l9h-a1-m1-cC
18 5l2u-a2-m2-cI 65 56 0.2879 0.2923 0.3393 2.93e-08 5l2u-a2-m2-cG_5l2u-a2-m2-cI
19 5dnf-a1-m1-cG 65 56 0.2879 0.2923 0.3393 2.93e-08 5dnf-a1-m1-cE_5dnf-a1-m1-cG
20 5dnf-a1-m1-cE 65 56 0.2879 0.2923 0.3393 2.93e-08 5dnf-a1-m1-cE_5dnf-a1-m1-cG
21 5dnf-a1-m1-cD 65 56 0.2879 0.2923 0.3393 2.93e-08 5dnf-a1-m1-cA_5dnf-a1-m1-cD
22 5dnf-a1-m1-cA 65 56 0.2879 0.2923 0.3393 2.93e-08 5dnf-a1-m1-cA_5dnf-a1-m1-cD
23 5l2u-a2-m2-cH 64 56 0.2879 0.2969 0.3393 3.09e-08 5l2u-a2-m2-cG_5l2u-a2-m2-cH
24 5l2u-a2-m2-cG 64 56 0.2879 0.2969 0.3393 3.09e-08 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
25 6log-a1-m2-cA 63 56 0.2879 0.3016 0.3393 3.88e-08 6log-a1-m1-cA_6log-a1-m2-cA
26 6log-a1-m1-cA 63 56 0.2879 0.3016 0.3393 3.88e-08 6log-a1-m1-cA_6log-a1-m2-cA
27 6aez-a1-m3-cA 64 56 0.2879 0.2969 0.3393 7.90e-08 6aez-a1-m2-cA_6aez-a1-m3-cA
28 6aez-a1-m2-cA 64 56 0.2879 0.2969 0.3393 7.90e-08 6aez-a1-m2-cA_6aez-a1-m3-cA
29 2ra4-a4-m4-cB 65 55 0.2576 0.2615 0.3091 4.34e-07 2ra4-a4-m2-cB_2ra4-a4-m4-cB
30 2ra4-a4-m2-cB 65 55 0.2576 0.2615 0.3091 4.34e-07 2ra4-a4-m2-cB_2ra4-a4-m4-cB
31 2ra4-a2-m4-cB 65 55 0.2576 0.2615 0.3091 4.34e-07 2ra4-a2-m4-cA_2ra4-a2-m4-cB
32 2ra4-a2-m4-cA 65 55 0.2576 0.2615 0.3091 4.34e-07 2ra4-a2-m4-cA_2ra4-a2-m4-cB
33 1ncv-a1-m1-cB 76 59 0.2879 0.2500 0.3220 1.12e-06 1ncv-a1-m1-cA_1ncv-a1-m1-cB
34 1ncv-a1-m1-cA 76 59 0.2879 0.2500 0.3220 1.12e-06 1ncv-a1-m1-cA_1ncv-a1-m1-cB
35 5yam-a1-m1-cB 69 56 0.2424 0.2319 0.2857 7.93e-06 5yam-a1-m1-cA_5yam-a1-m1-cB
36 5yam-a1-m1-cA 69 56 0.2424 0.2319 0.2857 7.93e-06 5yam-a1-m1-cA_5yam-a1-m1-cB
37 1f2l-a1-m1-cC 64 59 0.2727 0.2812 0.3051 1.58e-05 1f2l-a1-m1-cC_1f2l-a1-m1-cD
38 1f2l-a1-m1-cA 64 59 0.2727 0.2812 0.3051 1.58e-05 1f2l-a1-m1-cA_1f2l-a1-m1-cD
39 1f2l-a1-m1-cD 70 59 0.2727 0.2571 0.3051 1.87e-05 1f2l-a1-m1-cA_1f2l-a1-m1-cD, 1f2l-a1-m1-cC_1f2l-a1-m1-cD
40 2hci-a1-m1-cA 68 65 0.3333 0.3235 0.3385 5.32e-05 2hci-a1-m1-cB_2hci-a1-m1-cA
41 2hci-a1-m1-cB 65 60 0.3182 0.3231 0.3500 6.71e-05 2hci-a1-m1-cB_2hci-a1-m1-cA
42 5eki-a7-m1-cA 72 61 0.2121 0.1944 0.2295 1.05e-04 5eki-a7-m1-cF_5eki-a7-m1-cA
43 5eki-a7-m1-cF 70 61 0.2121 0.2000 0.2295 1.13e-04 5eki-a7-m1-cF_5eki-a7-m1-cA
44 4mhe-a2-m1-cB 69 57 0.2879 0.2754 0.3333 2.20e-04 4mhe-a2-m1-cC_4mhe-a2-m1-cB
45 4mhe-a2-m1-cC 61 57 0.2879 0.3115 0.3333 2.63e-04 4mhe-a2-m1-cC_4mhe-a2-m1-cB
46 2fj2-a2-m1-cC 68 54 0.2576 0.2500 0.3148 0.007 2fj2-a2-m1-cD_2fj2-a2-m1-cC
47 2fj2-a2-m1-cD 67 54 0.2576 0.2537 0.3148 0.007 2fj2-a2-m1-cD_2fj2-a2-m1-cC
48 5ltl-a1-m1-cB 68 32 0.1667 0.1618 0.3438 0.007 5ltl-a1-m1-cA_5ltl-a1-m1-cB
49 5ltl-a1-m1-cA 67 32 0.1667 0.1642 0.3438 0.008 5ltl-a1-m1-cA_5ltl-a1-m1-cB
50 1mi2-a1-m1-cB 73 56 0.2576 0.2329 0.3036 0.026 1mi2-a1-m1-cA_1mi2-a1-m1-cB
51 1mi2-a1-m1-cA 73 56 0.2576 0.2329 0.3036 0.026 1mi2-a1-m1-cA_1mi2-a1-m1-cB
52 3n52-a3-m1-cD 70 56 0.2576 0.2429 0.3036 0.027 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
53 3n52-a3-m1-cB 71 56 0.2576 0.2394 0.3036 0.028 3n52-a3-m1-cD_3n52-a3-m1-cB
54 3n52-a3-m1-cC 67 56 0.2576 0.2537 0.3036 0.030 3n52-a3-m1-cC_3n52-a3-m1-cD
55 1nr4-a5-m3-cE 69 55 0.2121 0.2029 0.2545 0.030 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
56 1nr4-a5-m4-cG 66 55 0.2121 0.2121 0.2545 0.032 1nr4-a5-m4-cG_1nr4-a5-m3-cE
57 1nr4-a5-m3-cF 66 55 0.2121 0.2121 0.2545 0.032 1nr4-a5-m3-cF_1nr4-a5-m3-cE
58 1nr4-a5-m1-cA 67 55 0.2121 0.2090 0.2545 0.034 1nr4-a5-m1-cA_1nr4-a5-m3-cE
59 1o7y-a1-m1-cB 62 61 0.1818 0.1935 0.1967 0.34 1o7y-a1-m1-cB_1o7y-a1-m1-cC
60 2mgs-a1-m1-cB 71 58 0.2424 0.2254 0.2759 2.5 2mgs-a1-m1-cA_2mgs-a1-m1-cB
61 2mgs-a1-m1-cA 71 58 0.2424 0.2254 0.2759 2.5 2mgs-a1-m1-cA_2mgs-a1-m1-cB
62 3hp3-a3-m1-cD 64 43 0.1515 0.1562 0.2326 4.7 3hp3-a3-m1-cD_3hp3-a3-m1-cF
63 3hp3-a3-m1-cF 65 43 0.1515 0.1538 0.2326 5.3 3hp3-a3-m1-cD_3hp3-a3-m1-cF
64 4uai-a1-m1-cA 68 43 0.1515 0.1471 0.2326 5.6 4uai-a1-m1-cB_4uai-a1-m1-cA
65 4uai-a1-m1-cB 67 43 0.1515 0.1493 0.2326 5.7 4uai-a1-m1-cB_4uai-a1-m1-cA
66 1tvx-a1-m1-cD 71 25 0.1515 0.1408 0.4000 7.3 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
67 1tvx-a1-m1-cB 71 25 0.1515 0.1408 0.4000 7.3 1tvx-a1-m1-cB_1tvx-a1-m1-cD
68 1tvx-a1-m1-cC 64 25 0.1515 0.1562 0.4000 8.2 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
69 1tvx-a1-m1-cA 64 25 0.1515 0.1562 0.4000 8.2 1tvx-a1-m1-cA_1tvx-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600