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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
VHQKILVCIQNEIAKSETQIRNNISSKSIDYGFPDDFYSKQRLAIHEKCMLYINVGGQRG
ELLMNQCELSMLQGLDIYIQQYIEDVDNS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4nsr-a3-m1-cF 89 89 1.0000 1.0000 1.0000 7.27e-62 4nsr-a3-m1-cE_4nsr-a3-m1-cF
2 4nsr-a3-m1-cE 89 89 1.0000 1.0000 1.0000 7.27e-62 4nsr-a3-m1-cE_4nsr-a3-m1-cF
3 5e7s-a2-m3-cI 287 17 0.1124 0.0348 0.5882 0.29 5e7s-a2-m3-cI_5e7s-a2-m1-cG
4 5e7s-a1-m1-cC 287 17 0.1124 0.0348 0.5882 0.29 5e7s-a1-m1-cC_5e7s-a1-m2-cE
5 5e7s-a1-m2-cE 288 17 0.1124 0.0347 0.5882 0.29 5e7s-a1-m1-cC_5e7s-a1-m2-cE
6 5e7s-a2-m1-cG 289 17 0.1124 0.0346 0.5882 0.29 5e7s-a2-m3-cI_5e7s-a2-m1-cG
7 4ypm-a1-m6-cA 290 17 0.1124 0.0345 0.5882 0.29 4ypm-a1-m2-cA_4ypm-a1-m6-cA
8 4ypm-a1-m2-cA 290 17 0.1124 0.0345 0.5882 0.29 4ypm-a1-m2-cA_4ypm-a1-m6-cA
9 6wqh-a1-m1-cF 537 17 0.1124 0.0186 0.5882 0.31 6wqh-a1-m1-cA_6wqh-a1-m1-cF
10 6wqh-a1-m1-cD 537 17 0.1124 0.0186 0.5882 0.31 6wqh-a1-m1-cD_6wqh-a1-m1-cC
11 6wqh-a1-m1-cA 537 17 0.1124 0.0186 0.5882 0.31 6wqh-a1-m1-cA_6wqh-a1-m1-cF
12 4ypl-a1-m1-cE 537 17 0.1124 0.0186 0.5882 0.31 4ypl-a1-m1-cD_4ypl-a1-m1-cE
13 4ypl-a1-m1-cD 537 17 0.1124 0.0186 0.5882 0.31 4ypl-a1-m1-cD_4ypl-a1-m1-cE, 4ypl-a1-m1-cD_4ypl-a1-m1-cF
14 4ypl-a1-m1-cB 537 17 0.1124 0.0186 0.5882 0.31 4ypl-a1-m1-cA_4ypl-a1-m1-cB
15 4ypl-a1-m1-cA 537 17 0.1124 0.0186 0.5882 0.31 4ypl-a1-m1-cA_4ypl-a1-m1-cB
16 6wqh-a1-m1-cC 538 17 0.1124 0.0186 0.5882 0.31 6wqh-a1-m1-cD_6wqh-a1-m1-cC
17 4ypl-a1-m1-cF 538 17 0.1124 0.0186 0.5882 0.31 4ypl-a1-m1-cD_4ypl-a1-m1-cF
18 7fid-a1-m1-cF 779 17 0.1124 0.0128 0.5882 0.31 7fid-a1-m1-cC_7fid-a1-m1-cF
19 7fid-a1-m1-cD 779 17 0.1124 0.0128 0.5882 0.31 7fid-a1-m1-cA_7fid-a1-m1-cD
20 7fid-a1-m1-cC 779 17 0.1124 0.0128 0.5882 0.31 7fid-a1-m1-cC_7fid-a1-m1-cF
21 7fid-a1-m1-cA 779 17 0.1124 0.0128 0.5882 0.31 7fid-a1-m1-cA_7fid-a1-m1-cD
22 7fd4-a1-m1-cF 779 17 0.1124 0.0128 0.5882 0.31 7fd4-a1-m1-cD_7fd4-a1-m1-cF
23 7fd4-a1-m1-cE 779 17 0.1124 0.0128 0.5882 0.31 7fd4-a1-m1-cB_7fd4-a1-m1-cE
24 7fd4-a1-m1-cD 779 17 0.1124 0.0128 0.5882 0.31 7fd4-a1-m1-cD_7fd4-a1-m1-cF
25 7fd4-a1-m1-cB 779 17 0.1124 0.0128 0.5882 0.31 7fd4-a1-m1-cA_7fd4-a1-m1-cB, 7fd4-a1-m1-cB_7fd4-a1-m1-cE
26 7fd4-a1-m1-cA 779 17 0.1124 0.0128 0.5882 0.31 7fd4-a1-m1-cA_7fd4-a1-m1-cB
27 2uuz-a1-m1-cA 89 31 0.1348 0.1348 0.3871 3.5 2uuz-a1-m1-cB_2uuz-a1-m1-cA
28 2uuz-a1-m1-cB 85 31 0.1348 0.1412 0.3871 3.5 2uuz-a1-m1-cB_2uuz-a1-m1-cA
29 5dg5-a1-m1-cB 297 40 0.1011 0.0303 0.2250 5.6 5dg5-a1-m1-cA_5dg5-a1-m1-cB
30 5dg5-a1-m1-cA 297 40 0.1011 0.0303 0.2250 5.6 5dg5-a1-m1-cA_5dg5-a1-m1-cB
31 7uft-a1-m1-cD 1032 12 0.0899 0.0078 0.6667 6.3 7uft-a1-m1-cA_7uft-a1-m1-cD, 7uft-a1-m1-cB_7uft-a1-m1-cD, 7uft-a1-m1-cC_7uft-a1-m1-cD
32 7uft-a1-m1-cC 1032 12 0.0899 0.0078 0.6667 6.3 7uft-a1-m1-cC_7uft-a1-m1-cD
33 7uft-a1-m1-cB 1032 12 0.0899 0.0078 0.6667 6.3 7uft-a1-m1-cB_7uft-a1-m1-cD
34 7uft-a1-m1-cA 1032 12 0.0899 0.0078 0.6667 6.3 7uft-a1-m1-cA_7uft-a1-m1-cD
35 4dnc-a3-m1-cA 271 46 0.1348 0.0443 0.2609 7.9 4dnc-a3-m1-cB_4dnc-a3-m1-cA
36 4dnc-a3-m1-cB 267 46 0.1348 0.0449 0.2609 8.3 4dnc-a3-m1-cB_4dnc-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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