Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=42)
VKALYDYEGQTDDELSFPEGAIIRILWEGEFNGRIGVFPSVL

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 6gbu-a1-m1-cE 42 42 1.0000 1.0000 1.0000 1.59e-25 6gbu-a1-m1-cE_6gbu-a1-m1-cG
2 6gbu-a1-m1-cG 54 52 1.0000 0.7778 0.8077 2.63e-22 6gbu-a1-m1-cE_6gbu-a1-m1-cG
3 5sxp-a2-m1-cD 60 47 0.4524 0.3167 0.4043 2.79e-07 5sxp-a2-m1-cD_5sxp-a2-m1-cB
4 5sxp-a2-m1-cB 61 47 0.4524 0.3115 0.4043 2.88e-07 5sxp-a2-m1-cD_5sxp-a2-m1-cB
5 2esw-a3-m1-cB 57 47 0.4524 0.3333 0.4043 3.84e-07 2esw-a3-m1-cB_2esw-a3-m1-cA
6 2p4r-a2-m2-cA 55 47 0.4524 0.3455 0.4043 3.89e-07 2p4r-a2-m1-cA_2p4r-a2-m2-cA
7 2p4r-a2-m1-cA 55 47 0.4524 0.3455 0.4043 3.89e-07 2p4r-a2-m1-cA_2p4r-a2-m2-cA
8 2ak5-a1-m2-cB 64 47 0.4524 0.2969 0.4043 4.31e-07 2ak5-a1-m2-cA_2ak5-a1-m2-cB
9 2ak5-a1-m2-cA 60 47 0.4524 0.3167 0.4043 4.32e-07 2ak5-a1-m2-cA_2ak5-a1-m2-cB
10 6a9c-a1-m1-cA 59 46 0.5476 0.3898 0.5000 4.62e-07 6a9c-a1-m1-cA_6a9c-a1-m1-cB
11 2esw-a3-m1-cA 60 47 0.4524 0.3167 0.4043 5.75e-07 2esw-a3-m1-cB_2esw-a3-m1-cA
12 6a9c-a1-m1-cB 66 46 0.5476 0.3485 0.5000 5.98e-07 6a9c-a1-m1-cA_6a9c-a1-m1-cB
13 2sem-a1-m1-cB 59 47 0.4524 0.3220 0.4043 1.10e-06 2sem-a1-m1-cA_2sem-a1-m1-cB
14 2sem-a1-m1-cA 58 47 0.4524 0.3276 0.4043 1.24e-06 2sem-a1-m1-cA_2sem-a1-m1-cB
15 2d0n-a1-m1-cC 56 47 0.3810 0.2857 0.3404 1.04e-05 2d0n-a1-m1-cC_2d0n-a1-m1-cA
16 2d0n-a1-m1-cA 59 47 0.3810 0.2712 0.3404 1.13e-05 2d0n-a1-m1-cC_2d0n-a1-m1-cA
17 2d1x-a2-m1-cD 59 45 0.4762 0.3390 0.4444 9.15e-05 2d1x-a2-m1-cD_2d1x-a2-m1-cC
18 2d1x-a2-m1-cC 66 45 0.4762 0.3030 0.4444 1.37e-04 2d1x-a2-m1-cD_2d1x-a2-m1-cC
19 1shf-a1-m2-cB 59 47 0.4762 0.3390 0.4255 5.15e-04 1shf-a1-m2-cA_1shf-a1-m2-cB
20 1shf-a1-m2-cA 59 47 0.4762 0.3390 0.4255 5.15e-04 1shf-a1-m2-cA_1shf-a1-m2-cB
21 6cq7-a2-m2-cA 73 50 0.4048 0.2329 0.3400 5.75e-04 6cq7-a2-m1-cA_6cq7-a2-m2-cA
22 6cq7-a2-m1-cA 73 50 0.4048 0.2329 0.3400 5.75e-04 6cq7-a2-m1-cA_6cq7-a2-m2-cA
23 6aqb-a1-m2-cB 70 50 0.4048 0.2429 0.3400 6.07e-04 6aqb-a1-m1-cA_6aqb-a1-m2-cB
24 6aqb-a1-m1-cA 70 50 0.4048 0.2429 0.3400 6.07e-04 6aqb-a1-m1-cA_6aqb-a1-m2-cB
25 5k26-a1-m1-cA 77 50 0.4048 0.2208 0.3400 7.18e-04 5k26-a1-m1-cB_5k26-a1-m1-cA
26 5k26-a1-m1-cB 75 50 0.4048 0.2267 0.3400 7.48e-04 5k26-a1-m1-cB_5k26-a1-m1-cA
27 1wyx-a1-m1-cB 69 49 0.4286 0.2609 0.3673 0.001 1wyx-a1-m1-cA_1wyx-a1-m1-cB
28 1wyx-a1-m1-cA 68 49 0.4286 0.2647 0.3673 0.001 1wyx-a1-m1-cA_1wyx-a1-m1-cB
29 4iim-a1-m1-cB 55 46 0.3571 0.2727 0.3261 0.002 4iim-a1-m1-cB_4iim-a1-m1-cA
30 4iim-a1-m1-cA 57 46 0.3571 0.2632 0.3261 0.002 4iim-a1-m1-cB_4iim-a1-m1-cA
31 2hda-a3-m3-cA 59 47 0.4286 0.3051 0.3830 0.011 2hda-a3-m2-cA_2hda-a3-m3-cA
32 2hda-a3-m2-cA 59 47 0.4286 0.3051 0.3830 0.011 2hda-a3-m2-cA_2hda-a3-m3-cA
33 2hda-a2-m6-cA 59 47 0.4286 0.3051 0.3830 0.011 2hda-a2-m2-cA_2hda-a2-m6-cA
34 2hda-a2-m2-cA 59 47 0.4286 0.3051 0.3830 0.011 2hda-a2-m2-cA_2hda-a2-m6-cA
35 2bzy-a1-m1-cB 62 13 0.2381 0.1613 0.7692 0.14 2bzy-a1-m1-cA_2bzy-a1-m1-cB
36 2bzy-a1-m1-cA 62 13 0.2381 0.1613 0.7692 0.14 2bzy-a1-m1-cA_2bzy-a1-m1-cB
37 7dpa-a1-m1-cD 1642 46 0.3810 0.0097 0.3478 0.42 7dpa-a1-m1-cA_7dpa-a1-m1-cD
38 7dpa-a1-m1-cA 1642 46 0.3810 0.0097 0.3478 0.42 7dpa-a1-m1-cA_7dpa-a1-m1-cD
39 1bu1-a1-m1-cC 56 29 0.3095 0.2321 0.4483 0.80 1bu1-a1-m1-cC_1bu1-a1-m1-cE
40 1bu1-a1-m1-cE 57 29 0.3095 0.2281 0.4483 0.89 1bu1-a1-m1-cC_1bu1-a1-m1-cE
41 2hck-a1-m1-cB 437 32 0.3571 0.0343 0.4688 0.98 2hck-a1-m1-cA_2hck-a1-m1-cB
42 2hck-a1-m1-cA 437 32 0.3571 0.0343 0.4688 0.98 2hck-a1-m1-cA_2hck-a1-m1-cB
43 4u5w-a1-m1-cB 163 28 0.3095 0.0798 0.4643 1.0 4u5w-a1-m1-cD_4u5w-a1-m1-cB
44 1abq-a1-m2-cA 56 24 0.2381 0.1786 0.4167 1.3 1abq-a1-m1-cA_1abq-a1-m2-cA
45 1abq-a1-m1-cA 56 24 0.2381 0.1786 0.4167 1.3 1abq-a1-m1-cA_1abq-a1-m2-cA
46 2iim-a1-m2-cA 62 26 0.2857 0.1935 0.4615 1.3 2iim-a1-m1-cA_2iim-a1-m2-cA
47 2iim-a1-m1-cA 62 26 0.2857 0.1935 0.4615 1.3 2iim-a1-m1-cA_2iim-a1-m2-cA
48 3eg1-a1-m1-cA 58 24 0.2381 0.1724 0.4167 1.4 3eg1-a1-m1-cB_3eg1-a1-m1-cA
49 3eg1-a1-m1-cB 56 24 0.2381 0.1786 0.4167 1.4 3eg1-a1-m1-cB_3eg1-a1-m1-cA
50 4le9-a1-m2-cA 59 47 0.3810 0.2712 0.3404 1.4 4le9-a1-m1-cA_4le9-a1-m2-cA
51 4le9-a1-m1-cA 59 47 0.3810 0.2712 0.3404 1.4 4le9-a1-m1-cA_4le9-a1-m2-cA
52 7v9k-a1-m1-cg 120 23 0.2143 0.0750 0.3913 1.5 7v9k-a1-m1-cU_7v9k-a1-m1-cg
53 7v96-a1-m1-cG 120 23 0.2143 0.0750 0.3913 1.5 7v96-a1-m1-cM_7v96-a1-m1-cG
54 4u5w-a1-m1-cD 160 29 0.3095 0.0813 0.4483 1.5 4u5w-a1-m1-cD_4u5w-a1-m1-cB
55 7v96-a1-m1-cM 119 23 0.2143 0.0756 0.3913 1.5 7v96-a1-m1-cM_7v96-a1-m1-cG
56 7v9k-a1-m1-cU 109 23 0.2143 0.0826 0.3913 1.9 7v9k-a1-m1-cU_7v9k-a1-m1-cg
57 1x27-a1-m1-cF 163 26 0.2857 0.0736 0.4615 2.1 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
58 1x27-a1-m1-cD 163 26 0.2857 0.0736 0.4615 2.1 1x27-a1-m1-cD_1x27-a1-m1-cF
59 1x27-a1-m1-cA 163 26 0.2857 0.0736 0.4615 2.1 1x27-a1-m1-cA_1x27-a1-m1-cF
60 2oaw-a5-m4-cD 65 26 0.2381 0.1538 0.3846 2.2 2oaw-a5-m1-cB_2oaw-a5-m4-cD, 2oaw-a5-m3-cC_2oaw-a5-m4-cD
61 2oaw-a5-m3-cC 65 26 0.2381 0.1538 0.3846 2.2 2oaw-a5-m3-cC_2oaw-a5-m4-cD
62 2oaw-a5-m1-cB 65 26 0.2381 0.1538 0.3846 2.2 2oaw-a5-m1-cB_2oaw-a5-m4-cD
63 3nmz-a1-m1-cD 84 47 0.3333 0.1667 0.2979 2.7 3nmz-a1-m1-cD_3nmz-a1-m1-cC
64 3nmz-a1-m1-cC 85 47 0.3333 0.1647 0.2979 2.7 3nmz-a1-m1-cD_3nmz-a1-m1-cC
65 7pvz-a1-m1-cB 60 47 0.3810 0.2667 0.3404 2.8 7pvz-a1-m1-cA_7pvz-a1-m1-cB
66 7pvz-a1-m1-cA 60 47 0.3810 0.2667 0.3404 2.8 7pvz-a1-m1-cA_7pvz-a1-m1-cB
67 2hsn-a1-m2-cA 160 26 0.2143 0.0563 0.3462 3.0 2hsn-a1-m1-cA_2hsn-a1-m2-cA
68 2hsn-a1-m1-cA 160 26 0.2143 0.0563 0.3462 3.0 2hsn-a1-m1-cA_2hsn-a1-m2-cA
69 1opl-a3-m2-cA 451 24 0.2381 0.0222 0.4167 3.6 1opl-a3-m1-cA_1opl-a3-m2-cA
70 1opl-a3-m1-cA 451 24 0.2381 0.0222 0.4167 3.6 1opl-a3-m1-cA_1opl-a3-m2-cA
71 2xql-a1-m1-cI 91 23 0.2143 0.0989 0.3913 3.6 2xql-a1-m1-cG_2xql-a1-m1-cI
72 2xql-a1-m1-cG 91 23 0.2143 0.0989 0.3913 3.6 2xql-a1-m1-cG_2xql-a1-m1-cI
73 5wgx-a2-m2-cA 664 27 0.3095 0.0196 0.4815 3.9 5wgx-a2-m1-cA_5wgx-a2-m2-cA
74 5wgx-a2-m1-cA 664 27 0.3095 0.0196 0.4815 3.9 5wgx-a2-m1-cA_5wgx-a2-m2-cA
75 6y5e-a1-m1-cG 108 23 0.2143 0.0833 0.3913 4.0 6y5e-a1-m1-cC_6y5e-a1-m1-cG
76 6m2m-a1-m1-cA 88 23 0.2381 0.1136 0.4348 4.0 6m2m-a1-m1-cK_6m2m-a1-m1-cA
77 6y5e-a1-m1-cC 107 23 0.2143 0.0841 0.3913 4.1 6y5e-a1-m1-cC_6y5e-a1-m1-cG
78 6m2m-a1-m1-cK 81 22 0.2381 0.1235 0.4545 4.2 6m2m-a1-m1-cK_6m2m-a1-m1-cA
79 3tsw-a5-m1-cB 194 36 0.2381 0.0515 0.2778 4.5 3tsw-a5-m1-cB_3tsw-a5-m1-cD
80 3tsw-a5-m1-cD 199 36 0.2381 0.0503 0.2778 4.7 3tsw-a5-m1-cB_3tsw-a5-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600