Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
VKEKLNGIIDQINKVNLLLEGEIEAVRRIAYMNQASSLQNQVEIGLIGEYLNISSWLETK
TLTKTEEGLM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4xyp-a1-m3-cA 70 70 1.0000 1.0000 1.0000 2.95e-44 4xyp-a1-m2-cA_4xyp-a1-m3-cA
2 4xyp-a1-m2-cA 70 70 1.0000 1.0000 1.0000 2.95e-44 4xyp-a1-m2-cA_4xyp-a1-m3-cA
3 6j9f-a1-m1-cB 203 28 0.1143 0.0394 0.2857 5.7 6j9f-a1-m1-cB_6j9f-a1-m1-cA
4 1dhk-a1-m2-cB 195 15 0.1286 0.0462 0.6000 5.9 1dhk-a1-m1-cB_1dhk-a1-m2-cB
5 1dhk-a1-m1-cB 195 15 0.1286 0.0462 0.6000 5.9 1dhk-a1-m1-cB_1dhk-a1-m2-cB
6 3prl-a1-m1-cA 475 59 0.2714 0.0400 0.3220 7.9 3prl-a1-m1-cA_3prl-a1-m1-cD
7 3prl-a1-m1-cB 476 59 0.2714 0.0399 0.3220 8.0 3prl-a1-m1-cB_3prl-a1-m1-cD
8 3rhh-a1-m1-cC 476 59 0.2714 0.0399 0.3220 8.3 3rhh-a1-m1-cC_3rhh-a1-m1-cD
9 3rhh-a1-m1-cD 480 59 0.2714 0.0396 0.3220 8.5 3rhh-a1-m1-cC_3rhh-a1-m1-cD
10 3prl-a1-m1-cD 480 59 0.2714 0.0396 0.3220 8.5 3prl-a1-m1-cA_3prl-a1-m1-cD, 3prl-a1-m1-cB_3prl-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600