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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
VKGSVDLEKLAFGLTKLNEDDLVGVVQMVTDNKTPEMNVTNNVEEGEFIIDLYSLPEGLL
KSLWDYVKKNT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7uhe-a1-m1-cC 74 71 1.0000 0.9595 1.0000 3.41e-46 7uhe-a1-m1-cA_7uhe-a1-m1-cC
2 7uhe-a1-m1-cA 71 71 1.0000 1.0000 1.0000 7.22e-46 7uhe-a1-m1-cA_7uhe-a1-m1-cC
3 5cxo-a1-m1-cA 129 40 0.2254 0.1240 0.4000 0.64 5cxo-a1-m1-cA_5cxo-a1-m1-cB
4 5cxo-a1-m1-cB 134 40 0.2254 0.1194 0.4000 0.71 5cxo-a1-m1-cA_5cxo-a1-m1-cB
5 1a6d-a1-m8-cB 502 64 0.2113 0.0299 0.2344 2.2 1a6d-a1-m2-cB_1a6d-a1-m8-cB
6 1a6d-a1-m2-cB 502 64 0.2113 0.0299 0.2344 2.2 1a6d-a1-m2-cB_1a6d-a1-m8-cB
7 1e0r-a1-m2-cB 154 64 0.2113 0.0974 0.2344 2.2 1e0r-a1-m1-cB_1e0r-a1-m2-cB
8 1e0r-a1-m1-cB 154 64 0.2113 0.0974 0.2344 2.2 1e0r-a1-m1-cB_1e0r-a1-m2-cB
9 3naw-a3-m1-cB 610 63 0.2676 0.0311 0.3016 7.9 3naw-a3-m1-cA_3naw-a3-m1-cB
10 3sqv-a3-m1-cB 606 63 0.2676 0.0314 0.3016 8.0 3sqv-a3-m1-cA_3sqv-a3-m1-cB
11 3sqv-a3-m1-cA 606 63 0.2676 0.0314 0.3016 8.0 3sqv-a3-m1-cA_3sqv-a3-m1-cB
12 3naw-a3-m1-cA 607 63 0.2676 0.0313 0.3016 8.4 3naw-a3-m1-cA_3naw-a3-m1-cB
13 3wx7-a3-m1-cB 402 29 0.1549 0.0274 0.3793 9.4 3wx7-a3-m1-cA_3wx7-a3-m1-cB
14 3wx7-a3-m1-cA 402 29 0.1549 0.0274 0.3793 9.4 3wx7-a3-m1-cA_3wx7-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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