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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
VKLANPLYTEWILEAIKKVKKQKQRPSEERICNAVSSSHGLDRKTVLEQLELSVKDGTIL
KVSNKGLNSYKDPDNPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8h7a-a2-m1-cE 77 77 1.0000 1.0000 1.0000 4.68e-52 8h7a-a2-m1-cE_8h7a-a2-m1-cF
2 8h7a-a2-m1-cF 78 77 1.0000 0.9872 1.0000 4.77e-52 8h7a-a2-m1-cE_8h7a-a2-m1-cF
3 3wa6-a2-m2-cA 466 28 0.1558 0.0258 0.4286 0.12 3wa6-a2-m1-cA_3wa6-a2-m2-cA
4 3wa6-a2-m1-cA 466 28 0.1558 0.0258 0.4286 0.12 3wa6-a2-m1-cA_3wa6-a2-m2-cA
5 1it7-a1-m1-cB 577 71 0.2597 0.0347 0.2817 0.99 1it7-a1-m1-cA_1it7-a1-m1-cB
6 1it7-a1-m1-cA 577 71 0.2597 0.0347 0.2817 0.99 1it7-a1-m1-cA_1it7-a1-m1-cB
7 1cq3-a1-m1-cB 224 24 0.1299 0.0446 0.4167 1.3 1cq3-a1-m1-cA_1cq3-a1-m1-cB
8 1cq3-a1-m1-cA 224 24 0.1299 0.0446 0.4167 1.3 1cq3-a1-m1-cA_1cq3-a1-m1-cB
9 4uuo-a1-m2-cA 328 31 0.1558 0.0366 0.3871 1.8 4uuo-a1-m1-cA_4uuo-a1-m2-cA
10 4uuo-a1-m1-cA 328 31 0.1558 0.0366 0.3871 1.8 4uuo-a1-m1-cA_4uuo-a1-m2-cA
11 1zki-a1-m1-cB 120 34 0.1688 0.1083 0.3824 7.2 1zki-a1-m1-cA_1zki-a1-m1-cB
12 1zki-a1-m1-cA 120 34 0.1688 0.1083 0.3824 7.2 1zki-a1-m1-cA_1zki-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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