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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
VKMTVTVGEERRARLRTAYTLTHLQEGHRTFSGFIAAALDAEVQRLEQRYNEGRRFENAE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3no7-a1-m1-cA 60 60 1.0000 1.0000 1.0000 3.08e-38 3no7-a1-m1-cB_3no7-a1-m1-cA
2 3no7-a1-m1-cB 59 59 0.9833 1.0000 1.0000 1.54e-37 3no7-a1-m1-cB_3no7-a1-m1-cA
3 7lwz-a1-m1-cF 373 24 0.2000 0.0322 0.5000 2.8 7lwz-a1-m1-cF_7lwz-a1-m1-cB, 7lwz-a1-m1-cF_7lwz-a1-m1-cE
4 7lwz-a1-m1-cB 385 24 0.2000 0.0312 0.5000 2.8 7lwz-a1-m1-cF_7lwz-a1-m1-cB
5 7lwz-a1-m1-cE 400 24 0.2000 0.0300 0.5000 2.8 7lwz-a1-m1-cF_7lwz-a1-m1-cE
6 4eqi-a3-m1-cA 271 29 0.1833 0.0406 0.3793 2.9 4eqi-a3-m1-cA_4eqi-a3-m1-cB
7 4eqi-a3-m1-cB 274 29 0.1833 0.0401 0.3793 3.1 4eqi-a3-m1-cA_4eqi-a3-m1-cB
8 1zr4-a1-m1-cE 183 21 0.1833 0.0601 0.5238 8.2 1zr4-a1-m1-cA_1zr4-a1-m1-cE
9 1zr4-a1-m1-cA 183 21 0.1833 0.0601 0.5238 8.2 1zr4-a1-m1-cA_1zr4-a1-m1-cE
10 1zr2-a1-m2-cA 183 21 0.1833 0.0601 0.5238 8.2 1zr2-a1-m2-cB_1zr2-a1-m2-cA
11 1zr2-a1-m1-cA 183 21 0.1833 0.0601 0.5238 8.2 1zr2-a1-m2-cB_1zr2-a1-m1-cA
12 1zr2-a1-m2-cB 182 21 0.1833 0.0604 0.5238 8.4 1zr2-a1-m2-cB_1zr2-a1-m1-cA, 1zr2-a1-m2-cB_1zr2-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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