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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
VKVKFLLNGEEKEVDTSKIRDVSRQGKNVKFLYNDNGKYGAGNVDEKDAPKELLDLARAE
REKKLN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2xiw-a1-m2-cB 66 66 1.0000 1.0000 1.0000 1.39e-41 2xiw-a1-m1-cA_2xiw-a1-m2-cB, 2xiw-a1-m1-cB_2xiw-a1-m2-cB, 2xiw-a1-m2-cA_2xiw-a1-m2-cB
2 2xiw-a1-m1-cB 66 66 1.0000 1.0000 1.0000 1.39e-41 2xiw-a1-m1-cB_2xiw-a1-m2-cB
3 2xiw-a1-m2-cA 63 63 0.9545 1.0000 1.0000 1.21e-39 2xiw-a1-m2-cA_2xiw-a1-m2-cB
4 2xiw-a1-m1-cA 63 63 0.9545 1.0000 1.0000 1.21e-39 2xiw-a1-m1-cA_2xiw-a1-m2-cB
5 1wvl-a1-m2-cB 80 65 0.7424 0.6125 0.7538 8.81e-25 1wvl-a1-m1-cA_1wvl-a1-m2-cB, 1wvl-a1-m1-cB_1wvl-a1-m2-cB, 1wvl-a1-m2-cA_1wvl-a1-m2-cB
6 1wvl-a1-m2-cA 80 65 0.7424 0.6125 0.7538 8.81e-25 1wvl-a1-m2-cA_1wvl-a1-m2-cB
7 1wvl-a1-m1-cB 80 65 0.7424 0.6125 0.7538 8.81e-25 1wvl-a1-m1-cB_1wvl-a1-m2-cB
8 1wvl-a1-m1-cA 80 65 0.7424 0.6125 0.7538 8.81e-25 1wvl-a1-m1-cA_1wvl-a1-m2-cB
9 2dw6-a2-m1-cD 388 49 0.2576 0.0438 0.3469 0.58 2dw6-a2-m1-cC_2dw6-a2-m1-cD
10 2dw6-a2-m1-cC 388 49 0.2576 0.0438 0.3469 0.58 2dw6-a2-m1-cC_2dw6-a2-m1-cD
11 3wae-a1-m1-cA 309 27 0.1667 0.0356 0.4074 4.8 3wae-a1-m1-cB_3wae-a1-m1-cA
12 3fs8-a2-m5-cB 257 29 0.1818 0.0467 0.4138 5.1 3fs8-a2-m4-cB_3fs8-a2-m5-cB
13 3fs8-a2-m4-cB 257 29 0.1818 0.0467 0.4138 5.1 3fs8-a2-m4-cB_3fs8-a2-m5-cB
14 3wae-a1-m1-cB 308 27 0.1667 0.0357 0.4074 5.1 3wae-a1-m1-cB_3wae-a1-m1-cA
15 7k47-a1-m3-cA 455 51 0.2576 0.0374 0.3333 5.5 7k47-a1-m2-cA_7k47-a1-m3-cA
16 7k47-a1-m2-cA 455 51 0.2576 0.0374 0.3333 5.5 7k47-a1-m2-cA_7k47-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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