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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
VLDEGAVLTLAADLSSATLDISQWSNVFNILRENDFEPFLCEVLAFCDGEITFSDLQSLR
FASQSSELLDVLPQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3soo-a2-m1-cC 74 74 1.0000 1.0000 1.0000 9.05e-48 3soo-a2-m1-cC_3soo-a2-m1-cB
2 3soo-a2-m1-cB 75 74 1.0000 0.9867 1.0000 9.32e-48 3soo-a2-m1-cC_3soo-a2-m1-cB
3 2lr6-a1-m1-cB 88 84 0.9595 0.8068 0.8452 8.99e-33 2lr6-a1-m1-cA_2lr6-a1-m1-cB
4 2lr6-a1-m1-cA 88 84 0.9595 0.8068 0.8452 8.99e-33 2lr6-a1-m1-cA_2lr6-a1-m1-cB
5 2ykp-a1-m1-cA 203 75 0.3514 0.1281 0.3467 1.79e-05 2ykp-a1-m1-cB_2ykp-a1-m1-cA
6 2ykp-a1-m1-cB 200 77 0.3514 0.1300 0.3377 1.86e-05 2ykp-a1-m1-cB_2ykp-a1-m1-cA
7 2ykq-a1-m1-cB 194 54 0.2432 0.0928 0.3333 7.80e-05 2ykq-a1-m1-cB_2ykq-a1-m1-cC
8 2ykq-a1-m1-cC 196 76 0.3243 0.1224 0.3158 8.87e-05 2ykq-a1-m1-cB_2ykq-a1-m1-cC
9 6zur-a1-m1-cB 398 18 0.0946 0.0176 0.3889 6.6 6zur-a1-m1-cA_6zur-a1-m1-cB
10 6zur-a1-m1-cA 398 18 0.0946 0.0176 0.3889 6.6 6zur-a1-m1-cA_6zur-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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