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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
VLDQLEVAAEPTRRRLVQLLTSGEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPRKDG
RFRYYRLDPQGLAQLRALFDSFWIDELDRLVADATE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3f6v-a1-m2-cA 96 96 1.0000 1.0000 1.0000 7.36e-66 3f6v-a1-m1-cA_3f6v-a1-m2-cA
2 3f6v-a1-m1-cA 96 96 1.0000 1.0000 1.0000 7.36e-66 3f6v-a1-m1-cA_3f6v-a1-m2-cA
3 7p6f-a3-m3-cDDD 97 78 0.3333 0.3299 0.4103 1.57e-10 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
4 7p6f-a3-m1-cDDD 97 78 0.3333 0.3299 0.4103 1.57e-10 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
5 6j05-a1-m1-cB 90 69 0.2604 0.2778 0.3623 4.27e-07 6j05-a1-m1-cB_6j05-a1-m1-cA
6 6j05-a1-m1-cA 101 69 0.2604 0.2475 0.3623 4.82e-07 6j05-a1-m1-cB_6j05-a1-m1-cA
7 3jth-a1-m1-cB 88 74 0.2708 0.2955 0.3514 6.23e-07 3jth-a1-m1-cB_3jth-a1-m1-cA
8 3jth-a1-m1-cA 92 74 0.2708 0.2826 0.3514 7.05e-07 3jth-a1-m1-cB_3jth-a1-m1-cA
9 6j0e-a1-m1-cA 124 80 0.2708 0.2097 0.3250 1.03e-06 6j0e-a1-m1-cA_6j0e-a1-m1-cB
10 6j0e-a1-m1-cB 125 80 0.2708 0.2080 0.3250 1.07e-06 6j0e-a1-m1-cA_6j0e-a1-m1-cB
11 2p4w-a1-m1-cA 197 72 0.2812 0.1371 0.3750 1.27e-06 2p4w-a1-m1-cA_2p4w-a1-m1-cB
12 2p4w-a1-m1-cB 198 72 0.2812 0.1364 0.3750 1.29e-06 2p4w-a1-m1-cA_2p4w-a1-m1-cB
13 2jsc-a1-m1-cA 96 66 0.2708 0.2708 0.3939 1.74e-06 2jsc-a1-m1-cA_2jsc-a1-m1-cB
14 2jsc-a1-m1-cB 97 66 0.2708 0.2680 0.3939 1.91e-06 2jsc-a1-m1-cA_2jsc-a1-m1-cB
15 6o8l-a1-m2-cA 92 80 0.2604 0.2717 0.3125 2.72e-06 6o8l-a1-m1-cA_6o8l-a1-m2-cA
16 6o8l-a1-m1-cA 92 80 0.2604 0.2717 0.3125 2.72e-06 6o8l-a1-m1-cA_6o8l-a1-m2-cA
17 3pqk-a3-m1-cF 99 74 0.2812 0.2727 0.3649 8.01e-06 3pqk-a3-m1-cF_3pqk-a3-m1-cE
18 3pqk-a3-m1-cE 100 74 0.2812 0.2700 0.3649 8.61e-06 3pqk-a3-m1-cF_3pqk-a3-m1-cE
19 2oqg-a1-m1-cD 105 58 0.2292 0.2095 0.3793 1.23e-05 2oqg-a1-m1-cC_2oqg-a1-m1-cD, 2oqg-a1-m1-cD_2oqg-a1-m1-cA, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
20 2oqg-a1-m1-cC 105 58 0.2292 0.2095 0.3793 1.23e-05 2oqg-a1-m1-cC_2oqg-a1-m1-cD
21 2oqg-a1-m1-cB 107 58 0.2292 0.2056 0.3793 1.25e-05 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
22 2oqg-a1-m1-cA 107 58 0.2292 0.2056 0.3793 1.44e-05 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cA
23 4ooi-a1-m1-cB 96 65 0.2292 0.2292 0.3385 2.63e-05 4ooi-a1-m1-cA_4ooi-a1-m1-cB
24 4ooi-a1-m1-cA 95 65 0.2292 0.2316 0.3385 2.70e-05 4ooi-a1-m1-cA_4ooi-a1-m1-cB
25 3f6o-a1-m1-cB 91 69 0.2083 0.2198 0.2899 4.65e-05 3f6o-a1-m1-cB_3f6o-a1-m1-cA
26 3f6o-a2-m2-cA 97 82 0.2396 0.2371 0.2805 5.40e-05 3f6o-a2-m1-cA_3f6o-a2-m2-cA
27 3f6o-a2-m1-cA 97 82 0.2396 0.2371 0.2805 5.40e-05 3f6o-a2-m1-cA_3f6o-a2-m2-cA
28 3f6o-a1-m1-cA 97 82 0.2396 0.2371 0.2805 5.40e-05 3f6o-a1-m1-cB_3f6o-a1-m1-cA
29 6jmi-a1-m1-cA 100 71 0.2500 0.2400 0.3380 8.51e-05 6jmi-a1-m1-cD_6jmi-a1-m1-cA
30 7txn-a1-m1-cB 105 68 0.2500 0.2286 0.3529 9.84e-05 7txn-a1-m1-cA_7txn-a1-m1-cB
31 7txn-a1-m1-cA 104 68 0.2500 0.2308 0.3529 1.10e-04 7txn-a1-m1-cA_7txn-a1-m1-cB
32 4omz-a2-m1-cD 98 61 0.2396 0.2347 0.3770 1.35e-04 4omz-a2-m1-cD_4omz-a2-m1-cC
33 4omz-a2-m1-cC 100 61 0.2396 0.2300 0.3770 1.37e-04 4omz-a2-m1-cD_4omz-a2-m1-cC
34 2lkp-a1-m1-cB 119 83 0.3021 0.2437 0.3494 1.61e-04 2lkp-a1-m1-cA_2lkp-a1-m1-cB
35 2lkp-a1-m1-cA 119 83 0.3021 0.2437 0.3494 1.61e-04 2lkp-a1-m1-cA_2lkp-a1-m1-cB
36 1r23-a1-m1-cB 97 69 0.3021 0.2990 0.4203 2.16e-04 1r23-a1-m1-cB_1r23-a1-m1-cA
37 1r23-a1-m1-cA 104 69 0.3021 0.2788 0.4203 2.66e-04 1r23-a1-m1-cB_1r23-a1-m1-cA
38 3gw2-a1-m2-cA 92 71 0.2396 0.2500 0.3239 3.67e-04 3gw2-a1-m1-cA_3gw2-a1-m2-cA
39 3gw2-a1-m1-cA 92 71 0.2396 0.2500 0.3239 3.67e-04 3gw2-a1-m1-cA_3gw2-a1-m2-cA
40 7kua-a1-m2-cA 149 72 0.2188 0.1409 0.2917 0.42 7kua-a1-m1-cA_7kua-a1-m2-cA
41 7kua-a1-m1-cA 149 72 0.2188 0.1409 0.2917 0.42 7kua-a1-m1-cA_7kua-a1-m2-cA
42 7t5w-a1-m1-cD 37 28 0.1354 0.3514 0.4643 1.3 7t5w-a1-m1-cA_7t5w-a1-m1-cD
43 6uvu-a1-m1-cA 111 66 0.2292 0.1982 0.3333 1.3 6uvu-a1-m1-cA_6uvu-a1-m1-cB
44 6uvu-a1-m1-cB 114 66 0.2292 0.1930 0.3333 1.3 6uvu-a1-m1-cA_6uvu-a1-m1-cB
45 6r1l-a1-m2-cA 100 35 0.1250 0.1200 0.3429 1.4 6r1l-a1-m1-cA_6r1l-a1-m2-cA
46 6r1l-a1-m1-cA 100 35 0.1250 0.1200 0.3429 1.4 6r1l-a1-m1-cA_6r1l-a1-m2-cA
47 7t5v-a1-m2-cA 34 28 0.1354 0.3824 0.4643 1.9 7t5v-a1-m1-cA_7t5v-a1-m2-cA
48 7t5v-a1-m1-cA 34 28 0.1354 0.3824 0.4643 1.9 7t5v-a1-m1-cA_7t5v-a1-m2-cA
49 2x4h-a1-m1-cD 129 56 0.1875 0.1395 0.3214 2.4 2x4h-a1-m1-cD_2x4h-a1-m1-cB, 2x4h-a1-m1-cD_2x4h-a1-m1-cC
50 2x4h-a1-m1-cC 131 56 0.1875 0.1374 0.3214 2.5 2x4h-a1-m1-cB_2x4h-a1-m1-cC, 2x4h-a1-m1-cD_2x4h-a1-m1-cC
51 2x4h-a1-m1-cB 130 56 0.1875 0.1385 0.3214 2.5 2x4h-a1-m1-cB_2x4h-a1-m1-cC, 2x4h-a1-m1-cD_2x4h-a1-m1-cB
52 2yq8-a1-m1-cA 220 57 0.1979 0.0864 0.3333 2.6 2yq8-a1-m1-cA_2yq8-a1-m1-cB
53 7t5w-a1-m1-cA 35 25 0.1250 0.3429 0.4800 2.6 7t5w-a1-m1-cA_7t5w-a1-m1-cD
54 2yq8-a1-m1-cB 221 57 0.1979 0.0860 0.3333 2.7 2yq8-a1-m1-cA_2yq8-a1-m1-cB
55 3f72-a2-m1-cC 103 72 0.1979 0.1845 0.2639 3.9 3f72-a2-m1-cD_3f72-a2-m1-cC
56 5ey2-a1-m1-cC 224 47 0.1458 0.0625 0.2979 4.7 5ey2-a1-m1-cD_5ey2-a1-m1-cC
57 5ey2-a1-m1-cD 220 47 0.1458 0.0636 0.2979 5.0 5ey2-a1-m1-cD_5ey2-a1-m1-cA, 5ey2-a1-m1-cD_5ey2-a1-m1-cB, 5ey2-a1-m1-cD_5ey2-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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