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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
VLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDLGDSGVW
GLKKNFALLELLERLQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5vzv-a2-m2-cB 76 76 1.0000 1.0000 1.0000 8.84e-51 5vzv-a2-m1-cB_5vzv-a2-m2-cB
2 5vzv-a2-m1-cB 76 76 1.0000 1.0000 1.0000 8.84e-51 5vzv-a2-m1-cB_5vzv-a2-m2-cB
3 7zj3-a2-m1-cG 85 76 0.3684 0.3294 0.3684 6.40e-10 7zj3-a2-m1-cG_7zj3-a2-m1-cA
4 7zj3-a2-m1-cA 86 76 0.3684 0.3256 0.3684 6.54e-10 7zj3-a2-m1-cG_7zj3-a2-m1-cA
5 6qaj-a1-m1-cA 439 47 0.2500 0.0433 0.4043 1.18e-04 6qaj-a1-m1-cA_6qaj-a1-m1-cB
6 7z36-a1-m1-cA 433 47 0.2368 0.0416 0.3830 0.002 7z36-a1-m1-cA_7z36-a1-m1-cB
7 7z36-a1-m1-cB 446 47 0.2368 0.0404 0.3830 0.002 7z36-a1-m1-cA_7z36-a1-m1-cB
8 6qaj-a1-m1-cB 441 48 0.2368 0.0408 0.3750 0.004 6qaj-a1-m1-cA_6qaj-a1-m1-cB
9 5eya-a1-m1-cF 76 75 0.2895 0.2895 0.2933 0.51 5eya-a1-m1-cF_5eya-a1-m1-cG
10 5eya-a1-m1-cG 86 75 0.2895 0.2558 0.2933 0.55 5eya-a1-m1-cF_5eya-a1-m1-cG
11 6fga-a4-m1-cH 77 75 0.2632 0.2597 0.2667 0.66 6fga-a4-m1-cG_6fga-a4-m1-cH
12 6fga-a4-m1-cG 77 75 0.2632 0.2597 0.2667 0.66 6fga-a4-m1-cG_6fga-a4-m1-cH
13 4p5i-a1-m2-cA 240 21 0.1184 0.0375 0.4286 1.6 4p5i-a1-m1-cA_4p5i-a1-m2-cA
14 4p5i-a1-m1-cA 240 21 0.1184 0.0375 0.4286 1.6 4p5i-a1-m1-cA_4p5i-a1-m2-cA
15 6yxe-a2-m2-cB 72 46 0.1974 0.2083 0.3261 1.8 6yxe-a2-m1-cB_6yxe-a2-m2-cB
16 6yxe-a2-m1-cB 72 46 0.1974 0.2083 0.3261 1.8 6yxe-a2-m1-cB_6yxe-a2-m2-cB
17 1ddz-a1-m1-cB 481 26 0.1316 0.0208 0.3846 2.0 1ddz-a1-m1-cA_1ddz-a1-m1-cB
18 1ddz-a1-m1-cA 481 26 0.1316 0.0208 0.3846 2.0 1ddz-a1-m1-cA_1ddz-a1-m1-cB
19 1y1m-a3-m1-cB 264 28 0.1316 0.0379 0.3571 2.2 1y1m-a3-m1-cB_1y1m-a3-m1-cA
20 1y1m-a3-m1-cA 271 28 0.1316 0.0369 0.3571 2.2 1y1m-a3-m1-cB_1y1m-a3-m1-cA
21 5yuf-a1-m1-cB 47 31 0.1579 0.2553 0.3871 6.7 5yuf-a1-m1-cA_5yuf-a1-m1-cB
22 5yuf-a1-m1-cA 47 31 0.1579 0.2553 0.3871 6.7 5yuf-a1-m1-cA_5yuf-a1-m1-cB, 5yuf-a1-m1-cD_5yuf-a1-m1-cA
23 5yuf-a1-m1-cD 46 31 0.1579 0.2609 0.3871 6.8 5yuf-a1-m1-cD_5yuf-a1-m1-cA
24 7x98-a2-m1-cD 398 40 0.1711 0.0327 0.3250 7.0 7x98-a2-m1-cD_7x98-a2-m1-cC
25 7x98-a2-m1-cC 399 40 0.1711 0.0326 0.3250 7.0 7x98-a2-m1-cD_7x98-a2-m1-cC
26 5gi4-a1-m1-cA 218 15 0.1184 0.0413 0.6000 8.5 5gi4-a1-m1-cA_5gi4-a1-m1-cB
27 5gi4-a1-m1-cB 227 15 0.1184 0.0396 0.6000 8.7 5gi4-a1-m1-cA_5gi4-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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