Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
VLHGTMIPRTKEEIENIMKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAIQAALRQVGM
QLLERHANHCVAKAIREGSGEQSLRELMDVIKQFAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4m1p-a2-m9-cA 96 96 1.0000 1.0000 1.0000 3.06e-66 4m1p-a2-m12-cA_4m1p-a2-m9-cA
2 4m1p-a2-m12-cA 96 96 1.0000 1.0000 1.0000 3.06e-66 4m1p-a2-m12-cA_4m1p-a2-m9-cA
3 4m1p-a1-m4-cA 96 96 1.0000 1.0000 1.0000 3.06e-66 4m1p-a1-m3-cA_4m1p-a1-m4-cA
4 4m1p-a1-m3-cA 96 96 1.0000 1.0000 1.0000 3.06e-66 4m1p-a1-m3-cA_4m1p-a1-m4-cA
5 4adz-a1-m2-cB 90 64 0.3750 0.4000 0.5625 5.80e-21 4adz-a1-m2-cA_4adz-a1-m2-cB
6 4adz-a1-m2-cA 90 64 0.3750 0.4000 0.5625 5.80e-21 4adz-a1-m2-cA_4adz-a1-m2-cB
7 4uig-a1-m4-cA 91 64 0.3750 0.3956 0.5625 9.63e-21 4uig-a1-m3-cA_4uig-a1-m4-cA
8 4uig-a1-m3-cA 91 64 0.3750 0.3956 0.5625 9.63e-21 4uig-a1-m3-cA_4uig-a1-m4-cA
9 5fmn-a1-m2-cA 86 85 0.3542 0.3953 0.4000 1.47e-20 5fmn-a1-m2-cA_5fmn-a1-m2-cB
10 5fmn-a1-m1-cA 86 85 0.3542 0.3953 0.4000 1.47e-20 5fmn-a1-m1-cA_5fmn-a1-m2-cB
11 5fmn-a1-m2-cB 89 85 0.3542 0.3820 0.4000 1.48e-20 5fmn-a1-m1-cA_5fmn-a1-m2-cB, 5fmn-a1-m2-cA_5fmn-a1-m2-cB
12 2hh7-a2-m4-cA 85 75 0.2708 0.3059 0.3467 6.97e-16 2hh7-a2-m1-cA_2hh7-a2-m4-cA, 2hh7-a2-m3-cA_2hh7-a2-m4-cA
13 2hh7-a2-m3-cA 85 75 0.2708 0.3059 0.3467 6.97e-16 2hh7-a2-m3-cA_2hh7-a2-m4-cA
14 2hh7-a2-m1-cA 85 75 0.2708 0.3059 0.3467 6.97e-16 2hh7-a2-m1-cA_2hh7-a2-m4-cA
15 6ahx-a1-m2-cA 60 57 0.2188 0.3500 0.3684 1.19e-08 6ahx-a1-m1-cA_6ahx-a1-m2-cA
16 6ahx-a1-m1-cA 60 57 0.2188 0.3500 0.3684 1.19e-08 6ahx-a1-m1-cA_6ahx-a1-m2-cA
17 5lbm-a1-m1-cD 89 95 0.2604 0.2809 0.2632 2.38e-06 5lbm-a1-m1-cA_5lbm-a1-m1-cD, 5lbm-a1-m1-cB_5lbm-a1-m1-cD, 5lbm-a1-m1-cC_5lbm-a1-m1-cD
18 5lbm-a1-m1-cC 89 95 0.2604 0.2809 0.2632 2.38e-06 5lbm-a1-m1-cC_5lbm-a1-m1-cD
19 5lcy-a1-m1-cD 88 66 0.2188 0.2386 0.3182 3.11e-06 5lcy-a1-m1-cA_5lcy-a1-m1-cD, 5lcy-a1-m1-cC_5lcy-a1-m1-cD
20 5lcy-a1-m1-cC 88 66 0.2188 0.2386 0.3182 3.11e-06 5lcy-a1-m1-cC_5lcy-a1-m1-cD
21 5lcy-a1-m1-cA 88 66 0.2188 0.2386 0.3182 3.11e-06 5lcy-a1-m1-cA_5lcy-a1-m1-cD
22 5lbm-a1-m1-cB 82 86 0.2188 0.2561 0.2442 0.002 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cB_5lbm-a1-m1-cD
23 5lbm-a1-m1-cA 82 86 0.2188 0.2561 0.2442 0.002 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cA_5lbm-a1-m1-cD
24 1e3j-a1-m4-cA 348 55 0.1667 0.0460 0.2909 2.6 1e3j-a1-m1-cA_1e3j-a1-m4-cA, 1e3j-a1-m2-cA_1e3j-a1-m4-cA, 1e3j-a1-m3-cA_1e3j-a1-m4-cA
25 1e3j-a1-m3-cA 348 55 0.1667 0.0460 0.2909 2.6 1e3j-a1-m3-cA_1e3j-a1-m4-cA
26 1e3j-a1-m2-cA 348 55 0.1667 0.0460 0.2909 2.6 1e3j-a1-m2-cA_1e3j-a1-m4-cA
27 1e3j-a1-m1-cA 348 55 0.1667 0.0460 0.2909 2.6 1e3j-a1-m1-cA_1e3j-a1-m4-cA
28 3k67-a1-m1-cB 156 22 0.1250 0.0769 0.5455 6.6 3k67-a1-m1-cA_3k67-a1-m1-cB
29 3k67-a1-m1-cA 156 22 0.1250 0.0769 0.5455 6.6 3k67-a1-m1-cA_3k67-a1-m1-cB
30 8glv-a1-m1-cGt 4520 35 0.0938 0.0020 0.2571 6.6 8glv-a1-m1-cDb_8glv-a1-m1-cGt
31 8glv-a1-m1-cDb 4520 35 0.0938 0.0020 0.2571 6.6 8glv-a1-m1-cDb_8glv-a1-m1-cGt

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600