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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
VLRGSGHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGEPVEFT
FKKSSKGFESLRVTGPGGNPCLGN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4alp-a1-m2-cB 86 84 1.0000 0.9767 1.0000 6.80e-58 4alp-a1-m4-cD_4alp-a1-m2-cB
2 4alp-a1-m4-cD 84 84 1.0000 1.0000 1.0000 8.34e-58 4alp-a1-m4-cD_4alp-a1-m2-cB
3 3ulj-a3-m2-cA 87 84 1.0000 0.9655 1.0000 9.23e-58 3ulj-a3-m2-cA_3ulj-a3-m2-cB
4 3ulj-a3-m1-cA 87 84 1.0000 0.9655 1.0000 9.23e-58 3ulj-a3-m1-cA_3ulj-a3-m2-cB
5 3ulj-a3-m2-cB 89 84 0.9881 0.9326 0.9881 2.90e-55 3ulj-a3-m1-cA_3ulj-a3-m2-cB, 3ulj-a3-m2-cA_3ulj-a3-m2-cB
6 7f3i-a1-m1-cA 93 82 0.4167 0.3763 0.4268 3.74e-14 7f3i-a1-m1-cE_7f3i-a1-m1-cA
7 7f3i-a1-m1-cE 91 82 0.4167 0.3846 0.4268 5.10e-14 7f3i-a1-m1-cE_7f3i-a1-m1-cA
8 3i2z-a1-m1-cB 67 70 0.3452 0.4328 0.4143 3.16e-11 3i2z-a1-m1-cB_3i2z-a1-m1-cA
9 3i2z-a1-m1-cA 71 70 0.3452 0.4085 0.4143 3.47e-11 3i2z-a1-m1-cB_3i2z-a1-m1-cA
10 2i5m-a2-m2-cX 66 70 0.3214 0.4091 0.3857 4.46e-10 2i5m-a2-m1-cX_2i5m-a2-m2-cX
11 2i5m-a2-m1-cX 66 70 0.3214 0.4091 0.3857 4.46e-10 2i5m-a2-m1-cX_2i5m-a2-m2-cX
12 2hax-a1-m1-cB 66 69 0.2976 0.3788 0.3623 1.67e-08 2hax-a1-m1-cA_2hax-a1-m1-cB
13 2hax-a1-m1-cA 66 69 0.2976 0.3788 0.3623 1.67e-08 2hax-a1-m1-cA_2hax-a1-m1-cB
14 1c9o-a1-m1-cB 66 69 0.2976 0.3788 0.3623 1.67e-08 1c9o-a1-m1-cA_1c9o-a1-m1-cB
15 1c9o-a1-m1-cA 66 69 0.2976 0.3788 0.3623 1.67e-08 1c9o-a1-m1-cA_1c9o-a1-m1-cB
16 1hzb-a1-m1-cB 66 69 0.2976 0.3788 0.3623 1.69e-08 1hzb-a1-m1-cA_1hzb-a1-m1-cB
17 1hzb-a1-m1-cA 66 69 0.2976 0.3788 0.3623 1.69e-08 1hzb-a1-m1-cA_1hzb-a1-m1-cB
18 3cam-a1-m1-cB 65 69 0.3214 0.4154 0.3913 5.06e-08 3cam-a1-m1-cA_3cam-a1-m1-cB
19 3cam-a1-m1-cA 65 69 0.3214 0.4154 0.3913 5.06e-08 3cam-a1-m1-cA_3cam-a1-m1-cB
20 5jx4-a1-m1-cB 66 69 0.2857 0.3636 0.3478 1.21e-06 5jx4-a1-m1-cA_5jx4-a1-m1-cB
21 5jx4-a1-m1-cA 65 69 0.2857 0.3692 0.3478 1.34e-06 5jx4-a1-m1-cA_5jx4-a1-m1-cB
22 2bh8-a1-m2-cB 86 35 0.1905 0.1860 0.4571 0.013 2bh8-a1-m1-cA_2bh8-a1-m2-cB, 2bh8-a1-m1-cB_2bh8-a1-m2-cB, 2bh8-a1-m2-cA_2bh8-a1-m2-cB
23 2bh8-a1-m1-cB 86 35 0.1905 0.1860 0.4571 0.013 2bh8-a1-m1-cB_2bh8-a1-m2-cB
24 2bh8-a1-m2-cA 85 35 0.1905 0.1882 0.4571 0.013 2bh8-a1-m2-cA_2bh8-a1-m2-cB
25 2bh8-a1-m1-cA 85 35 0.1905 0.1882 0.4571 0.013 2bh8-a1-m1-cA_2bh8-a1-m2-cB
26 6ebn-a1-m1-cB 957 24 0.1429 0.0125 0.5000 8.7 6ebn-a1-m1-cB_6ebn-a1-m1-cA
27 6ebn-a1-m1-cA 960 24 0.1429 0.0125 0.5000 8.7 6ebn-a1-m1-cB_6ebn-a1-m1-cA
28 3c8v-a2-m1-cD 454 28 0.1548 0.0286 0.4643 9.3 3c8v-a2-m1-cD_3c8v-a2-m1-cC
29 3c8v-a2-m1-cC 455 28 0.1548 0.0286 0.4643 9.8 3c8v-a2-m1-cD_3c8v-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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