Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
VLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDNEELDKKYAGLLEKKWTSVIRLQ
KKVELESKLNEAKEEF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1uuj-a2-m1-cD 76 76 1.0000 1.0000 1.0000 1.35e-48 1uuj-a2-m1-cC_1uuj-a2-m1-cD
2 1uuj-a2-m1-cC 76 76 1.0000 1.0000 1.0000 1.35e-48 1uuj-a2-m1-cC_1uuj-a2-m1-cD
3 2o2c-a2-m1-cC 561 40 0.2105 0.0285 0.4000 2.4 2o2c-a2-m1-cC_2o2c-a2-m1-cB
4 2o2c-a2-m1-cB 564 40 0.2105 0.0284 0.4000 2.4 2o2c-a2-m1-cC_2o2c-a2-m1-cB
5 2xtd-a1-m2-cA 68 67 0.2368 0.2647 0.2687 3.1 2xtd-a1-m2-cB_2xtd-a1-m2-cA
6 1v08-a1-m1-cB 490 46 0.1711 0.0265 0.2826 7.6 1v08-a1-m1-cA_1v08-a1-m1-cB
7 1v08-a1-m1-cA 490 46 0.1711 0.0265 0.2826 7.6 1v08-a1-m1-cA_1v08-a1-m1-cB
8 5vk4-a1-m1-cB 330 29 0.1579 0.0364 0.4138 9.1 5vk4-a1-m1-cA_5vk4-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600