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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
VLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7v4c-a1-m1-cF 62 60 1.0000 0.9677 1.0000 2.91e-33 7v4c-a1-m1-cA_7v4c-a1-m1-cF, 7v4c-a1-m1-cB_7v4c-a1-m1-cF
2 7v4c-a1-m1-cB 62 60 1.0000 0.9677 1.0000 2.91e-33 7v4c-a1-m1-cB_7v4c-a1-m1-cF
3 7v4c-a1-m1-cA 62 60 1.0000 0.9677 1.0000 2.91e-33 7v4c-a1-m1-cA_7v4c-a1-m1-cF
4 6a6b-a1-m1-cL 63 60 1.0000 0.9524 1.0000 2.99e-33 6a6b-a1-m1-cK_6a6b-a1-m1-cL
5 6a6b-a1-m1-cK 63 60 1.0000 0.9524 1.0000 2.99e-33 6a6b-a1-m1-cK_6a6b-a1-m1-cL
6 6a6b-a1-m1-cI 63 60 1.0000 0.9524 1.0000 2.99e-33 6a6b-a1-m1-cC_6a6b-a1-m1-cI
7 6a6b-a1-m1-cC 63 60 1.0000 0.9524 1.0000 2.99e-33 6a6b-a1-m1-cC_6a6b-a1-m1-cI
8 6osm-a1-m1-cJ 60 60 1.0000 1.0000 1.0000 3.15e-33 6osm-a1-m1-cI_6osm-a1-m1-cJ
9 6osm-a1-m1-cI 60 60 1.0000 1.0000 1.0000 3.15e-33 6osm-a1-m1-cI_6osm-a1-m1-cJ
10 8cz3-a1-m1-cN 72 60 1.0000 0.8333 1.0000 3.49e-33 8cz3-a1-m1-cM_8cz3-a1-m1-cN
11 8cz3-a1-m1-cM 72 60 1.0000 0.8333 1.0000 3.49e-33 8cz3-a1-m1-cM_8cz3-a1-m1-cN
12 8cys-a1-m1-cO 72 60 1.0000 0.8333 1.0000 3.49e-33 8cys-a1-m1-cN_8cys-a1-m1-cO
13 8cys-a1-m1-cN 72 60 1.0000 0.8333 1.0000 3.49e-33 8cys-a1-m1-cN_8cys-a1-m1-cO
14 6xyq-a1-m1-cF 64 60 1.0000 0.9375 1.0000 3.74e-33 6xyq-a1-m1-cB_6xyq-a1-m1-cF
15 6xyq-a1-m1-cB 64 60 1.0000 0.9375 1.0000 3.74e-33 6xyq-a1-m1-cB_6xyq-a1-m1-cF
16 8h03-a1-m1-cF 61 60 1.0000 0.9836 1.0000 3.77e-33 8h03-a1-m1-cB_8h03-a1-m1-cF
17 8h03-a1-m1-cB 61 60 1.0000 0.9836 1.0000 3.77e-33 8h03-a1-m1-cB_8h03-a1-m1-cF
18 8adw-a1-m1-cJ 99 60 1.0000 0.6061 1.0000 4.06e-33 8adw-a1-m1-cI_8adw-a1-m1-cJ
19 8adw-a1-m1-cI 99 60 1.0000 0.6061 1.0000 4.06e-33 8adw-a1-m1-cI_8adw-a1-m1-cJ
20 8aex-a1-m1-cI 71 60 1.0000 0.8451 1.0000 4.09e-33 8aex-a1-m1-cE_8aex-a1-m1-cI
21 8aex-a1-m1-cE 71 60 1.0000 0.8451 1.0000 4.09e-33 8aex-a1-m1-cE_8aex-a1-m1-cI
22 8fpt-a1-m1-cJ 74 60 1.0000 0.8108 1.0000 4.34e-33 8fpt-a1-m1-cG_8fpt-a1-m1-cJ, 8fpt-a1-m1-cH_8fpt-a1-m1-cJ
23 8fpt-a1-m1-cH 74 60 1.0000 0.8108 1.0000 4.34e-33 8fpt-a1-m1-cH_8fpt-a1-m1-cJ
24 8fpt-a1-m1-cG 74 60 1.0000 0.8108 1.0000 4.34e-33 8fpt-a1-m1-cG_8fpt-a1-m1-cJ
25 8a9l-a1-m3-cA 70 60 1.0000 0.8571 1.0000 4.39e-33 8a9l-a1-m1-cA_8a9l-a1-m3-cA
26 8a9l-a1-m1-cA 70 60 1.0000 0.8571 1.0000 4.39e-33 8a9l-a1-m1-cA_8a9l-a1-m3-cA
27 6xyo-a1-m1-cJ 79 60 1.0000 0.7595 1.0000 4.57e-33 6xyo-a1-m1-cF_6xyo-a1-m1-cJ
28 6xyo-a1-m1-cF 79 60 1.0000 0.7595 1.0000 4.57e-33 6xyo-a1-m1-cF_6xyo-a1-m1-cJ
29 2n0a-a1-m1-cJ 140 60 1.0000 0.4286 1.0000 4.61e-33 2n0a-a1-m1-cH_2n0a-a1-m1-cJ, 2n0a-a1-m1-cI_2n0a-a1-m1-cJ
30 2n0a-a1-m1-cI 140 60 1.0000 0.4286 1.0000 4.61e-33 2n0a-a1-m1-cH_2n0a-a1-m1-cI, 2n0a-a1-m1-cI_2n0a-a1-m1-cJ
31 2n0a-a1-m1-cH 140 60 1.0000 0.4286 1.0000 4.61e-33 2n0a-a1-m1-cG_2n0a-a1-m1-cH, 2n0a-a1-m1-cH_2n0a-a1-m1-cI, 2n0a-a1-m1-cH_2n0a-a1-m1-cJ
32 2n0a-a1-m1-cG 140 60 1.0000 0.4286 1.0000 4.61e-33 2n0a-a1-m1-cE_2n0a-a1-m1-cG, 2n0a-a1-m1-cF_2n0a-a1-m1-cG, 2n0a-a1-m1-cG_2n0a-a1-m1-cH
33 2n0a-a1-m1-cF 140 60 1.0000 0.4286 1.0000 4.61e-33 2n0a-a1-m1-cE_2n0a-a1-m1-cF, 2n0a-a1-m1-cF_2n0a-a1-m1-cG
34 2n0a-a1-m1-cE 140 60 1.0000 0.4286 1.0000 4.61e-33 2n0a-a1-m1-cC_2n0a-a1-m1-cE, 2n0a-a1-m1-cD_2n0a-a1-m1-cE, 2n0a-a1-m1-cE_2n0a-a1-m1-cF, 2n0a-a1-m1-cE_2n0a-a1-m1-cG
35 2n0a-a1-m1-cD 140 60 1.0000 0.4286 1.0000 4.61e-33 2n0a-a1-m1-cC_2n0a-a1-m1-cD, 2n0a-a1-m1-cD_2n0a-a1-m1-cE
36 2n0a-a1-m1-cC 140 60 1.0000 0.4286 1.0000 4.61e-33 2n0a-a1-m1-cB_2n0a-a1-m1-cC, 2n0a-a1-m1-cC_2n0a-a1-m1-cD, 2n0a-a1-m1-cC_2n0a-a1-m1-cE
37 2n0a-a1-m1-cB 140 60 1.0000 0.4286 1.0000 4.61e-33 2n0a-a1-m1-cA_2n0a-a1-m1-cB, 2n0a-a1-m1-cB_2n0a-a1-m1-cC
38 2n0a-a1-m1-cA 140 60 1.0000 0.4286 1.0000 4.61e-33 2n0a-a1-m1-cA_2n0a-a1-m1-cB
39 7v4b-a1-m1-cF 80 60 1.0000 0.7500 1.0000 4.65e-33 7v4b-a1-m1-cC_7v4b-a1-m1-cF, 7v4b-a1-m1-cD_7v4b-a1-m1-cF
40 7v4b-a1-m1-cD 80 60 1.0000 0.7500 1.0000 4.65e-33 7v4b-a1-m1-cD_7v4b-a1-m1-cF
41 7v4b-a1-m1-cC 80 60 1.0000 0.7500 1.0000 4.65e-33 7v4b-a1-m1-cC_7v4b-a1-m1-cF
42 8ads-a1-m1-cJ 75 60 1.0000 0.8000 1.0000 4.72e-33 8ads-a1-m1-cI_8ads-a1-m1-cJ
43 8ads-a1-m1-cI 75 60 1.0000 0.8000 1.0000 4.72e-33 8ads-a1-m1-cI_8ads-a1-m1-cJ
44 6cu7-a1-m1-cJ 60 59 0.9833 0.9833 1.0000 9.35e-33 6cu7-a1-m1-cF_6cu7-a1-m1-cJ
45 6cu7-a1-m1-cF 60 59 0.9833 0.9833 1.0000 9.35e-33 6cu7-a1-m1-cF_6cu7-a1-m1-cJ
46 7wnz-a1-m1-cI 65 60 0.9833 0.9077 0.9833 1.67e-32 7wnz-a1-m1-cH_7wnz-a1-m1-cI
47 7wnz-a1-m1-cH 65 60 0.9833 0.9077 0.9833 1.67e-32 7wnz-a1-m1-cH_7wnz-a1-m1-cI
48 7wo0-a1-m1-cT 65 60 0.9833 0.9077 0.9833 1.89e-32 7wo0-a1-m1-cS_7wo0-a1-m1-cT
49 7wo0-a1-m1-cS 65 60 0.9833 0.9077 0.9833 1.89e-32 7wo0-a1-m1-cS_7wo0-a1-m1-cT
50 8h05-a1-m1-cC 60 59 0.9833 0.9833 1.0000 2.09e-32 8h05-a1-m1-cA_8h05-a1-m1-cC
51 8h05-a1-m1-cA 60 59 0.9833 0.9833 1.0000 2.09e-32 8h05-a1-m1-cA_8h05-a1-m1-cC
52 7v4d-a1-m1-cF 58 58 0.9667 1.0000 1.0000 4.52e-32 7v4d-a1-m1-cC_7v4d-a1-m1-cF
53 7v4d-a1-m1-cC 58 58 0.9667 1.0000 1.0000 4.52e-32 7v4d-a1-m1-cC_7v4d-a1-m1-cF
54 6xyq-a1-m1-cE 81 58 0.9667 0.7160 1.0000 7.86e-32 6xyq-a1-m1-cC_6xyq-a1-m1-cE
55 6xyq-a1-m1-cC 81 58 0.9667 0.7160 1.0000 7.86e-32 6xyq-a1-m1-cC_6xyq-a1-m1-cE
56 6l1u-a1-m1-cB 99 59 0.9500 0.5758 0.9661 1.13e-30 6l1u-a1-m1-cA_6l1u-a1-m1-cB
57 6l1u-a1-m1-cA 99 59 0.9500 0.5758 0.9661 1.13e-30 6l1u-a1-m1-cA_6l1u-a1-m1-cB
58 8ceb-a1-m3-cC 58 57 0.9500 0.9828 1.0000 1.59e-30 8ceb-a1-m3-cA_8ceb-a1-m3-cC
59 8ceb-a1-m3-cA 58 57 0.9500 0.9828 1.0000 1.59e-30 8ceb-a1-m1-cA_8ceb-a1-m3-cA, 8ceb-a1-m3-cA_8ceb-a1-m3-cC
60 8ceb-a1-m1-cA 58 57 0.9500 0.9828 1.0000 1.59e-30 8ceb-a1-m1-cA_8ceb-a1-m3-cA
61 6l4s-a1-m1-cF 55 52 0.8500 0.9273 0.9808 1.24e-26 6l4s-a1-m1-cD_6l4s-a1-m1-cF, 6l4s-a1-m1-cE_6l4s-a1-m1-cF
62 6l4s-a1-m1-cE 55 52 0.8500 0.9273 0.9808 1.24e-26 6l4s-a1-m1-cE_6l4s-a1-m1-cF
63 6l4s-a1-m1-cD 55 52 0.8500 0.9273 0.9808 1.24e-26 6l4s-a1-m1-cD_6l4s-a1-m1-cF
64 7lc9-a1-m1-cG 51 51 0.8500 1.0000 1.0000 1.50e-26 7lc9-a1-m1-cL_7lc9-a1-m1-cG
65 7lc9-a1-m1-cE 51 51 0.8500 1.0000 1.0000 1.50e-26 7lc9-a1-m1-cD_7lc9-a1-m1-cE
66 7lc9-a1-m1-cD 51 51 0.8500 1.0000 1.0000 1.50e-26 7lc9-a1-m1-cD_7lc9-a1-m1-cE
67 7e0f-a1-m1-cF 49 47 0.7667 0.9388 0.9787 1.87e-23 7e0f-a1-m1-cC_7e0f-a1-m1-cF, 7e0f-a1-m1-cE_7e0f-a1-m1-cF
68 7e0f-a1-m1-cE 49 47 0.7667 0.9388 0.9787 1.87e-23 7e0f-a1-m1-cE_7e0f-a1-m1-cF
69 7e0f-a1-m1-cC 49 47 0.7667 0.9388 0.9787 1.87e-23 7e0f-a1-m1-cC_7e0f-a1-m1-cF
70 6cu8-a1-m1-cJ 41 41 0.6833 1.0000 1.0000 1.14e-19 6cu8-a1-m1-cF_6cu8-a1-m1-cJ, 6cu8-a1-m1-cH_6cu8-a1-m1-cJ, 6cu8-a1-m1-cI_6cu8-a1-m1-cJ
71 6cu8-a1-m1-cI 41 41 0.6833 1.0000 1.0000 1.14e-19 6cu8-a1-m1-cI_6cu8-a1-m1-cJ
72 6cu8-a1-m1-cH 41 41 0.6833 1.0000 1.0000 1.14e-19 6cu8-a1-m1-cH_6cu8-a1-m1-cJ
73 6cu8-a1-m1-cF 41 41 0.6833 1.0000 1.0000 1.14e-19 6cu8-a1-m1-cF_6cu8-a1-m1-cJ
74 7lc9-a1-m1-cK 38 36 0.6000 0.9474 1.0000 1.48e-16 7lc9-a1-m1-cJ_7lc9-a1-m1-cK
75 7lc9-a1-m1-cJ 38 36 0.6000 0.9474 1.0000 1.48e-16 7lc9-a1-m1-cJ_7lc9-a1-m1-cK
76 7lc9-a1-m1-cL 29 29 0.4833 1.0000 1.0000 4.15e-11 7lc9-a1-m1-cL_7lc9-a1-m1-cG
77 1u2g-a1-m1-cA 378 35 0.2833 0.0450 0.4857 3.3 1u2g-a1-m1-cB_1u2g-a1-m1-cA
78 2x77-a1-m1-cB 166 22 0.1500 0.0542 0.4091 5.3 2x77-a1-m1-cB_2x77-a1-m1-cA
79 7r9b-a1-m2-cA 223 50 0.2333 0.0628 0.2800 6.0 7r9b-a1-m1-cA_7r9b-a1-m2-cA
80 7r9b-a1-m1-cA 223 50 0.2333 0.0628 0.2800 6.0 7r9b-a1-m1-cA_7r9b-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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