Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
VNESLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLEGRENLARDLGIIEAE
GTVGGPLLLEVIRRW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2d68-a2-m2-cA 75 75 1.0000 1.0000 1.0000 5.78e-49 2d68-a2-m2-cA_2d68-a2-m2-cB
2 2d68-a2-m1-cA 75 75 1.0000 1.0000 1.0000 5.78e-49 2d68-a2-m1-cA_2d68-a2-m2-cB
3 2d68-a2-m2-cB 77 77 0.9867 0.9610 0.9610 4.50e-46 2d68-a2-m1-cA_2d68-a2-m2-cB, 2d68-a2-m2-cA_2d68-a2-m2-cB
4 3fpi-a1-m3-cA 157 35 0.1600 0.0764 0.3429 2.6 3fpi-a1-m2-cA_3fpi-a1-m3-cA
5 3fpi-a1-m2-cA 157 35 0.1600 0.0764 0.3429 2.6 3fpi-a1-m2-cA_3fpi-a1-m3-cA
6 3zds-a5-m13-cK 426 48 0.2533 0.0446 0.3958 3.0 3zds-a5-m1-cL_3zds-a5-m13-cK, 3zds-a5-m12-cJ_3zds-a5-m13-cK, 3zds-a5-m13-cI_3zds-a5-m13-cK
7 3zds-a5-m13-cI 426 48 0.2533 0.0446 0.3958 3.0 3zds-a5-m13-cI_3zds-a5-m13-cK
8 3zds-a5-m12-cJ 426 48 0.2533 0.0446 0.3958 3.0 3zds-a5-m12-cJ_3zds-a5-m13-cK
9 3zds-a5-m1-cL 426 48 0.2533 0.0446 0.3958 3.0 3zds-a5-m1-cL_3zds-a5-m13-cK
10 5en8-a1-m1-cB 173 26 0.1600 0.0694 0.4615 6.0 5en8-a1-m1-cA_5en8-a1-m1-cB
11 5en8-a1-m1-cA 172 26 0.1600 0.0698 0.4615 6.1 5en8-a1-m1-cA_5en8-a1-m1-cB
12 5en6-a1-m2-cA 175 26 0.1600 0.0686 0.4615 7.0 5en6-a1-m1-cA_5en6-a1-m2-cA
13 5en6-a1-m1-cA 175 26 0.1600 0.0686 0.4615 7.0 5en6-a1-m1-cA_5en6-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600