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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
VNFYDVAYDLENALRGSEEFTRLKNLYDEVNADESAKRFENFRDVQLRQAQKTVALVQQH
EKISQLEAEQRSLIGELNKIIKPLEELY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2oee-a2-m3-cB 88 88 1.0000 1.0000 1.0000 1.81e-59 2oee-a2-m1-cB_2oee-a2-m3-cB
2 2oee-a2-m1-cB 88 88 1.0000 1.0000 1.0000 1.81e-59 2oee-a2-m1-cB_2oee-a2-m3-cB
3 2oeq-a1-m1-cB 107 102 0.4773 0.3925 0.4118 8.39e-15 2oeq-a1-m1-cB_2oeq-a1-m1-cD
4 2oeq-a1-m1-cD 108 102 0.4773 0.3889 0.4118 8.79e-15 2oeq-a1-m1-cB_2oeq-a1-m1-cD, 2oeq-a1-m1-cD_2oeq-a1-m1-cC
5 2oeq-a1-m1-cC 110 102 0.4773 0.3818 0.4118 1.07e-14 2oeq-a1-m1-cD_2oeq-a1-m1-cC
6 1i7x-a1-m1-cC 521 86 0.2614 0.0441 0.2674 2.6 1i7x-a1-m1-cC_1i7x-a1-m1-cA
7 1i7x-a1-m1-cA 522 86 0.2614 0.0441 0.2674 2.8 1i7x-a1-m1-cC_1i7x-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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