Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=71)
VNGKKFKNFLAKLYGFGASIVILGAMFKILHWTGADLMLIIGLSTEAVIFFFSAFEKPAP
EYDWTLVYPEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7sau-a1-m1-cE 72 71 1.0000 0.9861 1.0000 6.07e-47 7sau-a1-m1-cF_7sau-a1-m1-cE
2 7sau-a1-m1-cF 71 71 1.0000 1.0000 1.0000 6.52e-47 7sau-a1-m1-cF_7sau-a1-m1-cE
3 7sat-a1-m1-cE 80 64 0.4366 0.3875 0.4844 2.56e-15 7sat-a1-m1-cF_7sat-a1-m1-cE
4 7sat-a1-m1-cF 77 61 0.4225 0.3896 0.4918 3.16e-15 7sat-a1-m1-cF_7sat-a1-m1-cE
5 7sax-a1-m1-cC 60 55 0.3662 0.4333 0.4727 9.34e-12 7sax-a1-m1-cG_7sax-a1-m1-cC
6 6ys8-a1-m1-cG 60 58 0.4507 0.5333 0.5517 1.24e-09 6ys8-a1-m1-cF_6ys8-a1-m1-cG
7 6ys8-a1-m1-cF 60 58 0.4507 0.5333 0.5517 1.24e-09 6ys8-a1-m1-cF_6ys8-a1-m1-cG
8 7saz-a1-m1-cF 57 51 0.4366 0.5439 0.6078 1.76e-09 7saz-a1-m1-cE_7saz-a1-m1-cF
9 7saz-a1-m1-cE 56 50 0.4225 0.5357 0.6000 1.31e-08 7saz-a1-m1-cE_7saz-a1-m1-cF
10 7sax-a1-m1-cG 50 45 0.2958 0.4200 0.4667 8.42e-08 7sax-a1-m1-cG_7sax-a1-m1-cC
11 7yj5-a1-m2-cA 389 35 0.2113 0.0386 0.4286 0.84 7yj5-a1-m1-cA_7yj5-a1-m2-cA
12 7yj5-a1-m1-cA 389 35 0.2113 0.0386 0.4286 0.84 7yj5-a1-m1-cA_7yj5-a1-m2-cA
13 2bwg-a1-m1-cD 328 18 0.1408 0.0305 0.5556 5.4 2bwg-a1-m1-cD_2bwg-a1-m1-cC
14 2bwg-a1-m1-cC 329 18 0.1408 0.0304 0.5556 5.4 2bwg-a1-m1-cD_2bwg-a1-m1-cC
15 3x1l-a1-m1-cG 152 21 0.1268 0.0592 0.4286 9.0 3x1l-a1-m1-cF_3x1l-a1-m1-cG

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600