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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
VNGKKFKNFLAKLYGFGASIVILGAMFKILHWTGADLMLIIGLSTEAVIFFFSAFEKPAP
EYDWTLVYPEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7sau-a1-m1-cE 72 71 1.0000 0.9861 1.0000 6.07e-47 7sau-a1-m1-cF_7sau-a1-m1-cE
2 7sau-a1-m1-cF 71 71 1.0000 1.0000 1.0000 6.52e-47 7sau-a1-m1-cF_7sau-a1-m1-cE
3 7sat-a1-m1-cE 80 64 0.4366 0.3875 0.4844 2.56e-15 7sat-a1-m1-cF_7sat-a1-m1-cE
4 7sat-a1-m1-cF 77 61 0.4225 0.3896 0.4918 3.16e-15 7sat-a1-m1-cF_7sat-a1-m1-cE
5 7sax-a1-m1-cC 60 55 0.3662 0.4333 0.4727 9.34e-12 7sax-a1-m1-cG_7sax-a1-m1-cC
6 6ys8-a1-m1-cG 60 58 0.4507 0.5333 0.5517 1.24e-09 6ys8-a1-m1-cF_6ys8-a1-m1-cG
7 6ys8-a1-m1-cF 60 58 0.4507 0.5333 0.5517 1.24e-09 6ys8-a1-m1-cF_6ys8-a1-m1-cG
8 7saz-a1-m1-cF 57 51 0.4366 0.5439 0.6078 1.76e-09 7saz-a1-m1-cE_7saz-a1-m1-cF
9 7saz-a1-m1-cE 56 50 0.4225 0.5357 0.6000 1.31e-08 7saz-a1-m1-cE_7saz-a1-m1-cF
10 7sax-a1-m1-cG 50 45 0.2958 0.4200 0.4667 8.42e-08 7sax-a1-m1-cG_7sax-a1-m1-cC
11 7yj5-a1-m2-cA 389 35 0.2113 0.0386 0.4286 0.84 7yj5-a1-m1-cA_7yj5-a1-m2-cA
12 7yj5-a1-m1-cA 389 35 0.2113 0.0386 0.4286 0.84 7yj5-a1-m1-cA_7yj5-a1-m2-cA
13 2bwg-a1-m1-cD 328 18 0.1408 0.0305 0.5556 5.4 2bwg-a1-m1-cD_2bwg-a1-m1-cC
14 2bwg-a1-m1-cC 329 18 0.1408 0.0304 0.5556 5.4 2bwg-a1-m1-cD_2bwg-a1-m1-cC
15 3x1l-a1-m1-cG 152 21 0.1268 0.0592 0.4286 9.0 3x1l-a1-m1-cF_3x1l-a1-m1-cG

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Reference:
Jacob Schwartz et al.

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