Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=28)
VNQHLCGSHLVEALYLVCGERGFFYTPK

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 7ins-a9-m2-cF 30 28 1.0000 0.9333 1.0000 1.06e-15 7ins-a9-m1-cD_7ins-a9-m2-cF
2 7ins-a9-m1-cD 30 28 1.0000 0.9333 1.0000 1.06e-15 7ins-a9-m1-cD_7ins-a9-m2-cF
3 8gsg-a1-m3-cD 30 28 1.0000 0.9333 1.0000 1.08e-15 8gsg-a1-m2-cB_8gsg-a1-m3-cD
4 8gsg-a1-m2-cB 30 28 1.0000 0.9333 1.0000 1.08e-15 8gsg-a1-m2-cB_8gsg-a1-m3-cD
5 5aiy-a1-m1-cL 30 28 1.0000 0.9333 1.0000 1.08e-15 5aiy-a1-m1-cJ_5aiy-a1-m1-cL
6 5aiy-a1-m1-cJ 30 28 1.0000 0.9333 1.0000 1.08e-15 5aiy-a1-m1-cJ_5aiy-a1-m1-cL
7 4f51-a1-m3-cD 30 28 1.0000 0.9333 1.0000 1.08e-15 4f51-a1-m2-cB_4f51-a1-m3-cD
8 4f51-a1-m2-cD 30 28 1.0000 0.9333 1.0000 1.08e-15 4f51-a1-m2-cB_4f51-a1-m2-cD
9 4f51-a1-m2-cB 30 28 1.0000 0.9333 1.0000 1.08e-15 4f51-a1-m2-cB_4f51-a1-m2-cD, 4f51-a1-m2-cB_4f51-a1-m3-cD
10 4aiy-a1-m1-cL 30 28 1.0000 0.9333 1.0000 1.08e-15 4aiy-a1-m1-cF_4aiy-a1-m1-cL
11 4aiy-a1-m1-cF 30 28 1.0000 0.9333 1.0000 1.08e-15 4aiy-a1-m1-cF_4aiy-a1-m1-cL
12 3fq9-a5-m3-cD 30 28 1.0000 0.9333 1.0000 1.08e-15 3fq9-a5-m2-cB_3fq9-a5-m3-cD
13 3fq9-a5-m2-cB 30 28 1.0000 0.9333 1.0000 1.08e-15 3fq9-a5-m2-cB_3fq9-a5-m3-cD
14 2aiy-a1-m1-cL 30 28 1.0000 0.9333 1.0000 1.08e-15 2aiy-a1-m1-cH_2aiy-a1-m1-cL
15 2aiy-a1-m1-cH 30 28 1.0000 0.9333 1.0000 1.08e-15 2aiy-a1-m1-cH_2aiy-a1-m1-cL
16 1rwe-a3-m3-cD 30 28 1.0000 0.9333 1.0000 1.08e-15 1rwe-a3-m2-cD_1rwe-a3-m3-cD
17 1rwe-a3-m2-cD 30 28 1.0000 0.9333 1.0000 1.08e-15 1rwe-a3-m2-cD_1rwe-a3-m3-cD
18 1ben-a9-m3-cB 30 28 1.0000 0.9333 1.0000 1.08e-15 1ben-a9-m3-cD_1ben-a9-m3-cB
19 1ben-a9-m1-cB 30 28 1.0000 0.9333 1.0000 1.08e-15 1ben-a9-m3-cD_1ben-a9-m1-cB
20 1aiy-a1-m1-cL 30 28 1.0000 0.9333 1.0000 1.08e-15 1aiy-a1-m1-cJ_1aiy-a1-m1-cL
21 1aiy-a1-m1-cJ 30 28 1.0000 0.9333 1.0000 1.08e-15 1aiy-a1-m1-cJ_1aiy-a1-m1-cL
22 5mam-a4-m3-c5 28 28 1.0000 1.0000 1.0000 1.14e-15 5mam-a4-m3-c3_5mam-a4-m3-c5
23 4une-a3-m1-cB 30 28 0.9643 0.9000 0.9643 3.31e-15 4une-a3-m2-cD_4une-a3-m1-cB
24 4une-a3-m2-cD 29 28 0.9643 0.9310 0.9643 3.86e-15 4une-a3-m2-cD_4une-a3-m1-cB
25 1ben-a9-m3-cD 28 27 0.9643 0.9643 1.0000 8.99e-15 1ben-a9-m3-cD_1ben-a9-m1-cB, 1ben-a9-m3-cD_1ben-a9-m3-cB
26 1zei-a1-m1-cF 53 28 0.9643 0.5094 0.9643 1.50e-14 1zei-a1-m1-cE_1zei-a1-m1-cF
27 1zei-a1-m1-cE 53 28 0.9643 0.5094 0.9643 1.50e-14 1zei-a1-m1-cE_1zei-a1-m1-cF
28 1htv-a1-m1-cL 27 26 0.9286 0.9630 1.0000 1.18e-13 1htv-a1-m1-cF_1htv-a1-m1-cL
29 1htv-a1-m1-cF 27 26 0.9286 0.9630 1.0000 1.18e-13 1htv-a1-m1-cF_1htv-a1-m1-cL
30 1htv-a1-m1-cD 27 26 0.9286 0.9630 1.0000 1.18e-13 1htv-a1-m1-cB_1htv-a1-m1-cD
31 1htv-a1-m1-cB 27 26 0.9286 0.9630 1.0000 1.18e-13 1htv-a1-m1-cB_1htv-a1-m1-cD
32 7jp3-a1-m1-cE 49 27 0.9286 0.5306 0.9630 1.18e-13 7jp3-a1-m1-cB_7jp3-a1-m1-cE
33 7jp3-a1-m1-cB 49 27 0.9286 0.5306 0.9630 1.18e-13 7jp3-a1-m1-cB_7jp3-a1-m1-cE
34 5wdm-a1-m1-cE 47 26 0.8929 0.5319 0.9615 1.49e-13 5wdm-a1-m1-cD_5wdm-a1-m1-cE, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
35 5wdm-a1-m1-cD 47 26 0.8929 0.5319 0.9615 1.49e-13 5wdm-a1-m1-cC_5wdm-a1-m1-cD, 5wdm-a1-m1-cD_5wdm-a1-m1-cE
36 5wdm-a1-m1-cB 46 25 0.8929 0.5435 1.0000 3.75e-13 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cB
37 3zs2-a1-m1-cJ 28 27 0.8571 0.8571 0.8889 1.83e-12 3zs2-a1-m1-cB_3zs2-a1-m1-cJ, 3zs2-a1-m1-cL_3zs2-a1-m1-cJ
38 5mam-a4-m3-c3 24 24 0.8571 1.0000 1.0000 2.64e-12 5mam-a4-m3-c3_5mam-a4-m3-c5
39 5wdm-a1-m1-cA 45 24 0.8571 0.5333 1.0000 5.92e-12 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cA
40 2wru-a1-m2-cB 24 24 0.8571 1.0000 1.0000 6.08e-12 2wru-a1-m1-cB_2wru-a1-m2-cB
41 2wru-a1-m1-cB 24 24 0.8571 1.0000 1.0000 6.08e-12 2wru-a1-m1-cB_2wru-a1-m2-cB
42 6s4j-a1-m3-cB 28 28 0.9286 0.9286 0.9286 8.63e-12 6s4j-a1-m2-cB_6s4j-a1-m3-cB
43 6s4j-a1-m2-cB 28 28 0.9286 0.9286 0.9286 8.63e-12 6s4j-a1-m2-cB_6s4j-a1-m3-cB
44 3zs2-a1-m1-cH 26 24 0.8214 0.8846 0.9583 1.57e-11 3zs2-a1-m1-cF_3zs2-a1-m1-cH
45 3zs2-a1-m1-cB 26 24 0.8214 0.8846 0.9583 1.57e-11 3zs2-a1-m1-cB_3zs2-a1-m1-cJ
46 3zs2-a1-m1-cF 24 24 0.8214 0.9583 0.9583 1.71e-11 3zs2-a1-m1-cF_3zs2-a1-m1-cH
47 3zs2-a1-m1-cL 25 24 0.8214 0.9200 0.9583 1.90e-11 3zs2-a1-m1-cL_3zs2-a1-m1-cJ
48 5wdm-a1-m1-cF 44 23 0.8214 0.5227 1.0000 3.96e-11 5wdm-a1-m1-cF_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
49 5wdm-a1-m1-cC 44 23 0.8214 0.5227 1.0000 3.96e-11 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cC_5wdm-a1-m1-cD
50 1dei-a3-m1-cD 23 22 0.7857 0.9565 1.0000 3.56e-10 1dei-a3-m1-cB_1dei-a3-m1-cD
51 1dei-a3-m1-cB 23 22 0.7857 0.9565 1.0000 3.56e-10 1dei-a3-m1-cB_1dei-a3-m1-cD
52 1wa3-a1-m1-cB 202 25 0.3214 0.0446 0.3600 1.5 1wa3-a1-m1-cA_1wa3-a1-m1-cB
53 1wa3-a1-m1-cA 202 25 0.3214 0.0446 0.3600 1.5 1wa3-a1-m1-cA_1wa3-a1-m1-cB
54 8ed3-a1-m1-cx 201 25 0.3214 0.0448 0.3600 1.6 8ed3-a1-m1-cV_8ed3-a1-m1-cx
55 8ed3-a1-m1-cV 201 25 0.3214 0.0448 0.3600 1.6 8ed3-a1-m1-cV_8ed3-a1-m1-cx

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600