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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
VPANAVTESDPAAVALKYHRDAASSERVAAARPGLPPEEQHCENCQFMNPDSAAADWKGC
QLFPGKLINLSGWCASWTLR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3hip-a2-m1-cB 80 80 1.0000 1.0000 1.0000 6.17e-56 3hip-a2-m1-cB_3hip-a2-m1-cC
2 3hip-a2-m1-cC 82 80 1.0000 0.9756 1.0000 6.54e-56 3hip-a2-m1-cB_3hip-a2-m1-cC
3 3hip-a1-m2-cA 82 80 1.0000 0.9756 1.0000 6.54e-56 3hip-a1-m1-cA_3hip-a1-m2-cA
4 3hip-a1-m1-cA 82 80 1.0000 0.9756 1.0000 6.54e-56 3hip-a1-m1-cA_3hip-a1-m2-cA
5 1cku-a1-m1-cB 85 81 0.7500 0.7059 0.7407 8.28e-41 1cku-a1-m1-cA_1cku-a1-m1-cB
6 1cku-a1-m1-cA 85 81 0.7500 0.7059 0.7407 8.28e-41 1cku-a1-m1-cA_1cku-a1-m1-cB
7 1js2-a1-m1-cD 89 81 0.7375 0.6629 0.7284 1.14e-39 1js2-a1-m1-cA_1js2-a1-m1-cD
8 1js2-a1-m1-cC 89 81 0.7375 0.6629 0.7284 1.14e-39 1js2-a1-m1-cA_1js2-a1-m1-cC
9 1js2-a1-m1-cB 89 81 0.7375 0.6629 0.7284 1.14e-39 1js2-a1-m1-cA_1js2-a1-m1-cB
10 1js2-a1-m1-cA 89 81 0.7375 0.6629 0.7284 1.14e-39 1js2-a1-m1-cA_1js2-a1-m1-cB, 1js2-a1-m1-cA_1js2-a1-m1-cC, 1js2-a1-m1-cA_1js2-a1-m1-cD
11 1hlq-a1-m1-cA 75 75 0.2500 0.2667 0.2667 7.14e-04 1hlq-a1-m1-cB_1hlq-a1-m1-cA, 1hlq-a1-m1-cC_1hlq-a1-m1-cA
12 1hlq-a1-m1-cC 74 75 0.2500 0.2703 0.2667 7.39e-04 1hlq-a1-m1-cB_1hlq-a1-m1-cC, 1hlq-a1-m1-cC_1hlq-a1-m1-cA
13 1hlq-a1-m1-cB 74 75 0.2500 0.2703 0.2667 7.39e-04 1hlq-a1-m1-cB_1hlq-a1-m1-cA, 1hlq-a1-m1-cB_1hlq-a1-m1-cC
14 7c8m-a1-m1-cC 128 17 0.1250 0.0781 0.5882 2.7 7c8m-a1-m1-cA_7c8m-a1-m1-cC
15 7c8m-a1-m1-cA 128 17 0.1250 0.0781 0.5882 2.7 7c8m-a1-m1-cA_7c8m-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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