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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
VPELPEDYEISEKTIITPIGVLKSAFENNIIIHSIFCLEDRTLIGLTEVFGPLQNPFYRI
KLPDSKKNLFDELKVRLGEKAFIVT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2v3m-a3-m1-cB 85 85 1.0000 1.0000 1.0000 4.12e-57 2v3m-a3-m1-cB_2v3m-a3-m1-cE
2 2v3m-a2-m1-cD 93 91 1.0000 0.9140 0.9341 9.79e-55 2v3m-a2-m1-cD_2v3m-a2-m1-cC
3 2v3m-a3-m1-cE 99 97 1.0000 0.8586 0.8763 6.97e-54 2v3m-a3-m1-cB_2v3m-a3-m1-cE
4 2v3m-a2-m1-cC 99 97 1.0000 0.8586 0.8763 6.97e-54 2v3m-a2-m1-cD_2v3m-a2-m1-cC
5 6jcn-a1-m1-cB 207 26 0.1176 0.0483 0.3846 4.6 6jcn-a1-m1-cA_6jcn-a1-m1-cB
6 6jcn-a1-m1-cA 207 26 0.1176 0.0483 0.3846 4.6 6jcn-a1-m1-cA_6jcn-a1-m1-cB
7 2bc4-a3-m2-cC 195 24 0.0706 0.0308 0.2500 5.1 2bc4-a3-m1-cA_2bc4-a3-m2-cC
8 2bc4-a3-m1-cA 188 24 0.0706 0.0319 0.2500 5.1 2bc4-a3-m1-cA_2bc4-a3-m2-cC
9 1hdm-a3-m3-cA 184 24 0.0706 0.0326 0.2500 5.3 1hdm-a3-m1-cA_1hdm-a3-m3-cA
10 1hdm-a3-m1-cA 184 24 0.0706 0.0326 0.2500 5.3 1hdm-a3-m1-cA_1hdm-a3-m3-cA

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Reference:
Jacob Schwartz et al.

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