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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
VPGLLEDITRTGLGSGLEFEEIKLLPEVAQQFYIELPIQISVVGGYHDLATFVSGVSSLP
RIVTLHDFEIKPVAPGSTSKLRMSILATYRYNDKGLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5uvr-a2-m2-cA 97 97 1.0000 1.0000 1.0000 1.25e-66 5uvr-a2-m1-cA_5uvr-a2-m2-cA
2 5uvr-a2-m1-cA 97 97 1.0000 1.0000 1.0000 1.25e-66 5uvr-a2-m1-cA_5uvr-a2-m2-cA
3 2rjz-a1-m1-cA 135 93 0.9485 0.6815 0.9892 1.44e-61 2rjz-a1-m1-cB_2rjz-a1-m1-cA
4 2rjz-a1-m1-cB 130 93 0.9278 0.6923 0.9677 4.62e-58 2rjz-a1-m1-cB_2rjz-a1-m1-cA
5 3jc9-a1-m1-cOl 189 69 0.2165 0.1111 0.3043 1.82e-05 3jc9-a1-m1-cOk_3jc9-a1-m1-cOl
6 3jc9-a1-m1-cOk 189 69 0.2165 0.1111 0.3043 1.82e-05 3jc9-a1-m1-cOk_3jc9-a1-m1-cOl
7 3jc8-a1-m1-cOl 189 69 0.2165 0.1111 0.3043 1.82e-05 3jc8-a1-m1-cOk_3jc8-a1-m1-cOl
8 3jc8-a1-m1-cOk 189 69 0.2165 0.1111 0.3043 1.82e-05 3jc8-a1-m1-cOk_3jc8-a1-m1-cOl
9 7n7s-a3-m1-cF 389 23 0.1031 0.0257 0.4348 4.2 7n7s-a3-m1-cD_7n7s-a3-m1-cF
10 7n7s-a3-m1-cD 389 23 0.1031 0.0257 0.4348 4.2 7n7s-a3-m1-cD_7n7s-a3-m1-cF
11 3kd6-a2-m1-cA 294 44 0.1546 0.0510 0.3409 7.6 3kd6-a2-m2-cB_3kd6-a2-m1-cA
12 3kd6-a1-m1-cA 294 44 0.1546 0.0510 0.3409 7.6 3kd6-a1-m1-cB_3kd6-a1-m1-cA
13 3kd6-a2-m2-cB 292 44 0.1546 0.0514 0.3409 8.4 3kd6-a2-m2-cB_3kd6-a2-m1-cA
14 3kd6-a1-m1-cB 292 44 0.1546 0.0514 0.3409 8.4 3kd6-a1-m1-cB_3kd6-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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