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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
VPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQK
LARSLQIGRA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ou6-a1-m1-cE 71 70 1.0000 0.9859 1.0000 7.18e-48 4ou6-a1-m1-cC_4ou6-a1-m1-cE
2 4ou6-a1-m1-cC 70 70 1.0000 1.0000 1.0000 7.79e-48 4ou6-a1-m1-cC_4ou6-a1-m1-cE
3 6aep-a1-m1-cB 72 70 0.8429 0.8194 0.8429 1.10e-40 6aep-a1-m1-cB_6aep-a1-m1-cA
4 6aep-a1-m1-cA 79 70 0.8429 0.7468 0.8429 2.16e-40 6aep-a1-m1-cB_6aep-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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