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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
VPPQVLPFSFGESAADVGDIASANCVVPKGDLPLEIRWSLNSAPIVNGENGFTLVRLNKR
TSLLNIDSLNAFHRGVYKCIATNPAGTSEYVAELQV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4x5l-a2-m3-cB 96 96 1.0000 1.0000 1.0000 1.99e-67 4x5l-a2-m1-cB_4x5l-a2-m3-cB
2 4x5l-a2-m1-cB 96 96 1.0000 1.0000 1.0000 1.99e-67 4x5l-a2-m1-cB_4x5l-a2-m3-cB
3 4wvr-a2-m1-cC 99 96 0.5104 0.4949 0.5104 6.90e-34 4wvr-a2-m1-cB_4wvr-a2-m1-cC
4 4wvr-a2-m1-cB 99 96 0.5104 0.4949 0.5104 6.90e-34 4wvr-a2-m1-cB_4wvr-a2-m1-cC
5 7y95-a1-m1-cA 100 94 0.2917 0.2800 0.2979 1.59e-07 7y95-a1-m1-cB_7y95-a1-m1-cA
6 7y95-a1-m1-cB 98 94 0.2917 0.2857 0.2979 1.63e-07 7y95-a1-m1-cB_7y95-a1-m1-cA
7 7y73-a1-m1-cA 98 94 0.2396 0.2347 0.2447 7.52e-07 7y73-a1-m1-cB_7y73-a1-m1-cA
8 7y73-a1-m1-cB 95 94 0.2396 0.2421 0.2447 2.85e-06 7y73-a1-m1-cB_7y73-a1-m1-cA
9 7y9a-a1-m2-cA 192 92 0.2917 0.1458 0.3043 8.69e-05 7y9a-a1-m1-cA_7y9a-a1-m2-cA
10 7y9a-a1-m1-cA 192 92 0.2917 0.1458 0.3043 8.69e-05 7y9a-a1-m1-cA_7y9a-a1-m2-cA
11 7y4x-a1-m1-cB 96 93 0.2812 0.2812 0.2903 4.60e-04 7y4x-a1-m1-cA_7y4x-a1-m1-cB
12 7y4x-a1-m1-cA 96 93 0.2812 0.2812 0.2903 4.60e-04 7y4x-a1-m1-cA_7y4x-a1-m1-cB
13 7y6o-a1-m2-cA 287 95 0.2812 0.0941 0.2842 0.002 7y6o-a1-m1-cA_7y6o-a1-m2-cA
14 7y6o-a1-m1-cA 287 95 0.2812 0.0941 0.2842 0.002 7y6o-a1-m1-cA_7y6o-a1-m2-cA
15 6u6t-a1-m1-cB 271 56 0.1667 0.0590 0.2857 0.008 6u6t-a1-m1-cA_6u6t-a1-m1-cB
16 6u6t-a1-m1-cA 268 56 0.1667 0.0597 0.2857 0.009 6u6t-a1-m1-cA_6u6t-a1-m1-cB
17 6igt-a1-m1-cD 116 35 0.1146 0.0948 0.3143 0.025 6igt-a1-m1-cC_6igt-a1-m1-cD, 6igt-a1-m1-cD_6igt-a1-m1-cA
18 6igt-a1-m1-cC 116 35 0.1146 0.0948 0.3143 0.025 6igt-a1-m1-cC_6igt-a1-m1-cD
19 1cs6-a1-m2-cA 382 85 0.2396 0.0602 0.2706 0.059 1cs6-a1-m1-cA_1cs6-a1-m2-cA
20 1cs6-a1-m2-cA 382 60 0.1771 0.0445 0.2833 2.1 1cs6-a1-m1-cA_1cs6-a1-m2-cA
21 1cs6-a1-m1-cA 382 85 0.2396 0.0602 0.2706 0.059 1cs6-a1-m1-cA_1cs6-a1-m2-cA
22 1cs6-a1-m1-cA 382 60 0.1771 0.0445 0.2833 2.1 1cs6-a1-m1-cA_1cs6-a1-m2-cA
23 4yfg-a1-m1-cB 481 54 0.1771 0.0353 0.3148 0.090 4yfg-a1-m1-cA_4yfg-a1-m1-cB
24 4yfg-a1-m1-cA 481 54 0.1771 0.0353 0.3148 0.090 4yfg-a1-m1-cA_4yfg-a1-m1-cB
25 6gsi-a1-m3-cG 200 79 0.2396 0.1150 0.2911 0.092 6gsi-a1-m3-cG_6gsi-a1-m3-cH
26 6gsi-a1-m3-cH 200 79 0.2396 0.1150 0.2911 0.095 6gsi-a1-m3-cG_6gsi-a1-m3-cH
27 2yd9-a1-m2-cA 278 52 0.1771 0.0612 0.3269 0.13 2yd9-a1-m1-cA_2yd9-a1-m2-cA
28 2yd9-a1-m1-cA 278 52 0.1771 0.0612 0.3269 0.13 2yd9-a1-m1-cA_2yd9-a1-m2-cA
29 5k6x-a1-m1-cB 367 58 0.1875 0.0490 0.3103 0.26 5k6x-a1-m1-cB_5k6x-a1-m1-cA
30 5k6z-a1-m1-cA 375 58 0.1875 0.0480 0.3103 0.27 5k6z-a1-m1-cA_5k6z-a1-m1-cB
31 5k6x-a1-m1-cA 374 58 0.1875 0.0481 0.3103 0.28 5k6x-a1-m1-cB_5k6x-a1-m1-cA
32 5k6z-a1-m1-cB 378 58 0.1875 0.0476 0.3103 0.28 5k6z-a1-m1-cA_5k6z-a1-m1-cB
33 6efz-a1-m2-cA 296 87 0.2500 0.0811 0.2759 0.40 6efz-a1-m1-cA_6efz-a1-m2-cA
34 6efz-a1-m1-cA 296 87 0.2500 0.0811 0.2759 0.40 6efz-a1-m1-cA_6efz-a1-m2-cA
35 4xhq-a1-m2-cA 388 35 0.1250 0.0309 0.3429 0.51 4xhq-a1-m1-cA_4xhq-a1-m2-cA
36 4xhq-a1-m1-cA 388 35 0.1250 0.0309 0.3429 0.51 4xhq-a1-m1-cA_4xhq-a1-m2-cA
37 2v5r-a1-m1-cB 391 35 0.1250 0.0307 0.3429 0.52 2v5r-a1-m1-cA_2v5r-a1-m1-cB
38 2v5r-a1-m1-cA 391 35 0.1250 0.0307 0.3429 0.52 2v5r-a1-m1-cA_2v5r-a1-m1-cB
39 6igo-a1-m1-cC 122 28 0.1042 0.0820 0.3571 0.60 6igo-a1-m1-cA_6igo-a1-m1-cC
40 6igo-a1-m1-cA 120 28 0.1042 0.0833 0.3571 0.65 6igo-a1-m1-cA_6igo-a1-m1-cC
41 6igt-a1-m1-cA 117 28 0.1042 0.0855 0.3571 0.66 6igt-a1-m1-cD_6igt-a1-m1-cA
42 5k6w-a1-m1-cB 475 69 0.1771 0.0358 0.2464 0.69 5k6w-a1-m1-cA_5k6w-a1-m1-cB
43 5k6w-a1-m1-cA 475 69 0.1771 0.0358 0.2464 0.69 5k6w-a1-m1-cA_5k6w-a1-m1-cB
44 6itq-a1-m1-cD 122 49 0.1979 0.1557 0.3878 0.96 6itq-a1-m1-cD_6itq-a1-m1-cC
45 6itq-a1-m1-cA 122 49 0.1979 0.1557 0.3878 0.96 6itq-a1-m1-cA_6itq-a1-m1-cC, 6itq-a1-m1-cB_6itq-a1-m1-cA
46 6itq-a1-m1-cC 125 49 0.1979 0.1520 0.3878 0.97 6itq-a1-m1-cA_6itq-a1-m1-cC, 6itq-a1-m1-cD_6itq-a1-m1-cC
47 6itp-a1-m1-cB 125 49 0.1979 0.1520 0.3878 0.97 6itp-a1-m1-cA_6itp-a1-m1-cB
48 6itp-a1-m1-cA 125 49 0.1979 0.1520 0.3878 0.97 6itp-a1-m1-cA_6itp-a1-m1-cB
49 6hci-a1-m1-cC 96 64 0.1875 0.1875 0.2812 1.1 6hci-a1-m1-cC_6hci-a1-m1-cD
50 6itq-a1-m1-cB 120 49 0.1979 0.1583 0.3878 1.1 6itq-a1-m1-cB_6itq-a1-m1-cA
51 6hci-a1-m1-cD 97 64 0.1875 0.1856 0.2812 1.3 6hci-a1-m1-cA_6hci-a1-m1-cD, 6hci-a1-m1-cC_6hci-a1-m1-cD
52 6hci-a1-m1-cA 97 64 0.1875 0.1856 0.2812 1.3 6hci-a1-m1-cA_6hci-a1-m1-cD
53 4x83-a2-m1-cD 391 34 0.1146 0.0281 0.3235 1.3 4x83-a2-m1-cC_4x83-a2-m1-cD
54 4x83-a2-m1-cC 389 34 0.1146 0.0283 0.3235 1.4 4x83-a2-m1-cC_4x83-a2-m1-cD
55 4xb7-a1-m1-cB 395 34 0.1146 0.0278 0.3235 1.4 4xb7-a1-m1-cA_4xb7-a1-m1-cB
56 4xb7-a1-m1-cA 395 34 0.1146 0.0278 0.3235 1.4 4xb7-a1-m1-cA_4xb7-a1-m1-cB
57 2yd6-a1-m2-cA 195 24 0.1146 0.0564 0.4583 1.5 2yd6-a1-m1-cA_2yd6-a1-m2-cA
58 2yd6-a1-m1-cA 195 24 0.1146 0.0564 0.4583 1.5 2yd6-a1-m1-cA_2yd6-a1-m2-cA
59 5xnp-a1-m1-cB 361 22 0.0938 0.0249 0.4091 1.6 5xnp-a1-m1-cA_5xnp-a1-m1-cB
60 5xnp-a1-m1-cA 361 22 0.0938 0.0249 0.4091 1.6 5xnp-a1-m1-cA_5xnp-a1-m1-cB
61 7ol2-a1-m1-cB 568 85 0.2396 0.0405 0.2706 2.0 7ol2-a1-m1-cA_7ol2-a1-m1-cB
62 7ol2-a1-m1-cA 568 85 0.2396 0.0405 0.2706 2.0 7ol2-a1-m1-cA_7ol2-a1-m1-cB
63 2iep-a3-m4-cA 187 53 0.1771 0.0909 0.3208 2.1 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m4-cA_2iep-a3-m4-cB
64 2iep-a3-m4-cA 187 83 0.2812 0.1444 0.3253 2.9 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m4-cA_2iep-a3-m4-cB
65 2iep-a3-m1-cA 187 53 0.1771 0.0909 0.3208 2.1 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m1-cA_2iep-a3-m4-cB
66 2iep-a3-m1-cA 187 83 0.2812 0.1444 0.3253 2.9 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m1-cA_2iep-a3-m4-cB
67 2iep-a2-m3-cA 187 53 0.1771 0.0909 0.3208 2.1 2iep-a2-m1-cB_2iep-a2-m3-cA
68 2iep-a2-m3-cA 187 83 0.2812 0.1444 0.3253 2.9 2iep-a2-m1-cB_2iep-a2-m3-cA
69 2iep-a3-m4-cB 187 53 0.1771 0.0909 0.3208 2.2 2iep-a3-m1-cA_2iep-a3-m4-cB, 2iep-a3-m1-cB_2iep-a3-m4-cB, 2iep-a3-m4-cA_2iep-a3-m4-cB
70 2iep-a3-m4-cB 187 83 0.2812 0.1444 0.3253 2.6 2iep-a3-m1-cA_2iep-a3-m4-cB, 2iep-a3-m1-cB_2iep-a3-m4-cB, 2iep-a3-m4-cA_2iep-a3-m4-cB
71 2iep-a3-m1-cB 187 53 0.1771 0.0909 0.3208 2.2 2iep-a3-m1-cB_2iep-a3-m4-cB
72 2iep-a3-m1-cB 187 83 0.2812 0.1444 0.3253 2.6 2iep-a3-m1-cB_2iep-a3-m4-cB
73 2iep-a2-m1-cB 187 53 0.1771 0.0909 0.3208 2.2 2iep-a2-m1-cB_2iep-a2-m3-cA
74 2iep-a2-m1-cB 187 83 0.2812 0.1444 0.3253 2.6 2iep-a2-m1-cB_2iep-a2-m3-cA
75 1cbg-a1-m2-cA 490 77 0.2083 0.0408 0.2597 2.5 1cbg-a1-m1-cA_1cbg-a1-m2-cA
76 1cbg-a1-m1-cA 490 77 0.2083 0.0408 0.2597 2.5 1cbg-a1-m1-cA_1cbg-a1-m2-cA
77 6za2-a1-m1-cB 1083 64 0.1667 0.0148 0.2500 2.6 6za2-a1-m1-cA_6za2-a1-m1-cB
78 6dle-a1-m1-cB 271 81 0.1979 0.0701 0.2346 2.6 6dle-a1-m1-cA_6dle-a1-m1-cB
79 6dle-a1-m1-cA 271 81 0.1979 0.0701 0.2346 2.6 6dle-a1-m1-cA_6dle-a1-m1-cB
80 5noi-a1-m2-cA 198 33 0.1250 0.0606 0.3636 2.6 5noi-a1-m1-cA_5noi-a1-m2-cA
81 5noi-a1-m1-cA 198 33 0.1250 0.0606 0.3636 2.6 5noi-a1-m1-cA_5noi-a1-m2-cA
82 6za2-a1-m1-cA 1081 64 0.1667 0.0148 0.2500 2.7 6za2-a1-m1-cA_6za2-a1-m1-cB
83 5lf5-a1-m2-cA 484 47 0.1354 0.0269 0.2766 2.8 5lf5-a1-m1-cA_5lf5-a1-m2-cA
84 5lf5-a1-m1-cA 484 47 0.1354 0.0269 0.2766 2.8 5lf5-a1-m1-cA_5lf5-a1-m2-cA
85 4jvp-a3-m1-cA 131 30 0.1354 0.0992 0.4333 2.8 4jvp-a3-m1-cB_4jvp-a3-m1-cA
86 1qz1-a1-m2-cA 288 65 0.1875 0.0625 0.2769 3.4 1qz1-a1-m1-cA_1qz1-a1-m2-cA
87 1qz1-a1-m1-cA 288 65 0.1875 0.0625 0.2769 3.4 1qz1-a1-m1-cA_1qz1-a1-m2-cA
88 1epf-a2-m1-cC 190 65 0.1875 0.0947 0.2769 5.0 1epf-a2-m1-cC_1epf-a2-m1-cD
89 1epf-a2-m1-cD 191 65 0.1875 0.0942 0.2769 5.5 1epf-a2-m1-cC_1epf-a2-m1-cD
90 7whk-a1-m1-cH 119 36 0.1354 0.1092 0.3611 8.9 7whk-a1-m1-cD_7whk-a1-m1-cH
91 7whk-a1-m1-cD 119 36 0.1354 0.1092 0.3611 8.9 7whk-a1-m1-cD_7whk-a1-m1-cH
92 5mj0-a1-m1-cA 80 30 0.1042 0.1250 0.3333 8.9 5mj0-a1-m1-cB_5mj0-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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