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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
VPSRFEDVRVVQVVAGWRVSVKIAETEEGEVVTVKAEFDECREIGEETGIPPREVKAMVE
AAARVGGWVDLKEREIKVQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6iwj-a1-m1-cB 79 79 1.0000 1.0000 1.0000 2.42e-49 6iwj-a1-m1-cA_6iwj-a1-m1-cB
2 6iwj-a1-m1-cA 79 79 1.0000 1.0000 1.0000 2.42e-49 6iwj-a1-m1-cA_6iwj-a1-m1-cB
3 3c19-a1-m3-cA 177 79 0.9367 0.4181 0.9367 1.20e-43 3c19-a1-m2-cA_3c19-a1-m3-cA
4 3c19-a1-m2-cA 177 79 0.9367 0.4181 0.9367 1.20e-43 3c19-a1-m2-cA_3c19-a1-m3-cA
5 2qe4-a1-m1-cA 207 38 0.1772 0.0676 0.3684 0.11 2qe4-a1-m1-cB_2qe4-a1-m1-cA
6 1l2i-a2-m2-cB 231 38 0.1772 0.0606 0.3684 0.15 1l2i-a2-m2-cB_1l2i-a2-m1-cA
7 1l2i-a2-m1-cA 233 38 0.1772 0.0601 0.3684 0.16 1l2i-a2-m2-cB_1l2i-a2-m1-cA
8 2jf9-a1-m2-cA 215 38 0.1772 0.0651 0.3684 0.17 2jf9-a1-m2-cC_2jf9-a1-m2-cA
9 2jf9-a1-m2-cC 214 38 0.1772 0.0654 0.3684 0.18 2jf9-a1-m2-cC_2jf9-a1-m2-cA
10 5exy-a1-m9-cA 247 48 0.1772 0.0567 0.2917 0.88 5exy-a1-m10-cA_5exy-a1-m9-cA, 5exy-a1-m5-cA_5exy-a1-m9-cA
11 5exy-a1-m5-cA 247 48 0.1772 0.0567 0.2917 0.88 5exy-a1-m5-cA_5exy-a1-m9-cA
12 5exy-a1-m10-cA 247 48 0.1772 0.0567 0.2917 0.88 5exy-a1-m10-cA_5exy-a1-m9-cA
13 1a52-a4-m1-cA 239 34 0.1772 0.0586 0.4118 1.0 1a52-a4-m1-cA_1a52-a4-m2-cB
14 1a52-a3-m3-cA 239 34 0.1772 0.0586 0.4118 1.0 1a52-a3-m1-cA_1a52-a3-m3-cA
15 1a52-a3-m1-cA 239 34 0.1772 0.0586 0.4118 1.0 1a52-a3-m1-cA_1a52-a3-m3-cA
16 1a52-a4-m2-cB 240 34 0.1772 0.0583 0.4118 1.0 1a52-a4-m1-cA_1a52-a4-m2-cB
17 6f39-a1-m1-cA 275 66 0.2278 0.0655 0.2727 1.3 6f39-a1-m1-cA_6f39-a1-m1-cB
18 5a9b-a1-m3-cA 209 48 0.1772 0.0670 0.2917 1.5 5a9b-a1-m2-cA_5a9b-a1-m3-cA
19 5a9b-a1-m2-cA 209 48 0.1772 0.0670 0.2917 1.5 5a9b-a1-m2-cA_5a9b-a1-m3-cA
20 6f39-a1-m1-cB 280 69 0.2278 0.0643 0.2609 2.0 6f39-a1-m1-cA_6f39-a1-m1-cB
21 4q50-a5-m2-cE 218 32 0.1519 0.0550 0.3750 2.4 4q50-a5-m1-cH_4q50-a5-m2-cE, 4q50-a5-m2-cB_4q50-a5-m2-cE
22 4q50-a5-m2-cC 220 32 0.1519 0.0545 0.3750 2.4 4q50-a5-m2-cB_4q50-a5-m2-cC
23 1uf5-a1-m2-cB 303 26 0.1392 0.0363 0.4231 2.5 1uf5-a1-m1-cA_1uf5-a1-m2-cB, 1uf5-a1-m1-cB_1uf5-a1-m2-cB, 1uf5-a1-m2-cA_1uf5-a1-m2-cB
24 1uf5-a1-m2-cA 303 26 0.1392 0.0363 0.4231 2.5 1uf5-a1-m2-cA_1uf5-a1-m2-cB
25 1uf5-a1-m1-cB 303 26 0.1392 0.0363 0.4231 2.5 1uf5-a1-m1-cB_1uf5-a1-m2-cB
26 1uf5-a1-m1-cA 303 26 0.1392 0.0363 0.4231 2.5 1uf5-a1-m1-cA_1uf5-a1-m2-cB
27 5t97-a1-m1-cB 191 33 0.1519 0.0628 0.3636 2.5 5t97-a1-m1-cA_5t97-a1-m1-cB
28 2qe4-a1-m1-cB 204 32 0.1519 0.0588 0.3750 2.7 2qe4-a1-m1-cB_2qe4-a1-m1-cA
29 5t97-a1-m1-cA 177 32 0.1519 0.0678 0.3750 2.7 5t97-a1-m1-cA_5t97-a1-m1-cB
30 4q50-a5-m1-cH 218 32 0.1519 0.0550 0.3750 2.8 4q50-a5-m1-cH_4q50-a5-m2-cE
31 4q50-a5-m2-cB 209 32 0.1519 0.0574 0.3750 2.8 4q50-a5-m2-cB_4q50-a5-m2-cC, 4q50-a5-m2-cB_4q50-a5-m2-cE
32 1jsw-a1-m1-cC 413 66 0.2025 0.0387 0.2424 2.9 1jsw-a1-m1-cC_1jsw-a1-m1-cD
33 7nfb-a1-m1-cA 241 55 0.2152 0.0705 0.3091 2.9 7nfb-a1-m1-cA_7nfb-a1-m1-cB
34 7nfb-a1-m1-cB 244 55 0.2152 0.0697 0.3091 2.9 7nfb-a1-m1-cA_7nfb-a1-m1-cB
35 1jsw-a1-m1-cB 460 66 0.2025 0.0348 0.2424 3.0 1jsw-a1-m1-cD_1jsw-a1-m1-cB
36 1jsw-a1-m1-cD 459 66 0.2025 0.0349 0.2424 3.0 1jsw-a1-m1-cA_1jsw-a1-m1-cD, 1jsw-a1-m1-cC_1jsw-a1-m1-cD, 1jsw-a1-m1-cD_1jsw-a1-m1-cB
37 1jsw-a1-m1-cA 459 66 0.2025 0.0349 0.2424 3.0 1jsw-a1-m1-cA_1jsw-a1-m1-cD
38 2a2f-a2-m2-cX 296 25 0.1392 0.0372 0.4400 3.9 2a2f-a2-m1-cX_2a2f-a2-m2-cX
39 2a2f-a2-m1-cX 296 25 0.1392 0.0372 0.4400 3.9 2a2f-a2-m1-cX_2a2f-a2-m2-cX
40 7yzm-a2-m1-cD 421 37 0.2025 0.0380 0.4324 4.5 7yzm-a2-m1-cC_7yzm-a2-m1-cD
41 7yzm-a2-m1-cC 421 37 0.2025 0.0380 0.4324 4.5 7yzm-a2-m1-cC_7yzm-a2-m1-cD
42 4eu9-a1-m1-cB 504 25 0.1392 0.0218 0.4400 5.0 4eu9-a1-m1-cB_4eu9-a1-m1-cA
43 4eu9-a1-m1-cA 513 25 0.1392 0.0214 0.4400 5.0 4eu9-a1-m1-cB_4eu9-a1-m1-cA
44 6f1c-a1-m1-cC 287 71 0.2405 0.0662 0.2676 6.8 6f1c-a1-m1-cC_6f1c-a1-m1-cA
45 6f1c-a1-m1-cA 291 71 0.2405 0.0653 0.2676 6.8 6f1c-a1-m1-cC_6f1c-a1-m1-cA
46 4nbm-a2-m1-cD 369 26 0.1519 0.0325 0.4615 7.0 4nbm-a2-m1-cC_4nbm-a2-m1-cD
47 4nbm-a2-m1-cC 369 26 0.1519 0.0325 0.4615 7.0 4nbm-a2-m1-cC_4nbm-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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