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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
VPVELHSFEDAQVIGGAFRDGDAVVFDMSLLSREEARRIVDFAAGLCFALRGKMQKIDSV
TFAVVPE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6scs-a1-m1-cA 70 67 1.0000 0.9571 1.0000 1.26e-43 6scs-a1-m1-cB_6scs-a1-m1-cA
2 6scs-a1-m1-cB 67 67 1.0000 1.0000 1.0000 2.03e-43 6scs-a1-m1-cB_6scs-a1-m1-cA
3 3zih-a1-m1-cA 79 60 0.2985 0.2532 0.3333 9.25e-08 3zih-a1-m1-cA_3zih-a1-m1-cB
4 3zih-a1-m1-cB 80 60 0.2985 0.2500 0.3333 9.87e-08 3zih-a1-m1-cA_3zih-a1-m1-cB
5 3u1h-a1-m1-cB 357 50 0.2090 0.0392 0.2800 0.036 3u1h-a1-m1-cA_3u1h-a1-m1-cB
6 3u1h-a1-m1-cA 355 51 0.2239 0.0423 0.2941 0.83 3u1h-a1-m1-cA_3u1h-a1-m1-cB
7 6hcp-a1-m1-cC 671 38 0.2537 0.0253 0.4474 1.1 6hcp-a1-m1-cB_6hcp-a1-m1-cC
8 6hcp-a1-m1-cB 671 38 0.2537 0.0253 0.4474 1.1 6hcp-a1-m1-cB_6hcp-a1-m1-cC
9 3pm6-a1-m1-cA 287 54 0.2687 0.0627 0.3333 3.6 3pm6-a1-m1-cB_3pm6-a1-m1-cA
10 3zbw-a1-m1-cA 120 31 0.1791 0.1000 0.3871 6.0 3zbw-a1-m1-cA_3zbw-a1-m1-cB
11 3zbw-a1-m1-cB 121 31 0.1791 0.0992 0.3871 6.1 3zbw-a1-m1-cA_3zbw-a1-m1-cB
12 4gi7-a1-m1-cC 309 31 0.2090 0.0453 0.4516 6.4 4gi7-a1-m1-cA_4gi7-a1-m1-cC
13 4gi7-a1-m1-cA 309 31 0.2090 0.0453 0.4516 6.4 4gi7-a1-m1-cA_4gi7-a1-m1-cC
14 7v2s-a1-m1-cA 247 36 0.1791 0.0486 0.3333 9.6 7v2s-a1-m1-cA_7v2s-a1-m1-cB
15 7v2s-a1-m1-cB 249 36 0.1791 0.0482 0.3333 9.6 7v2s-a1-m1-cA_7v2s-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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