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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=40)
VQLAHHFSEPEITLIIFGVMAGVIGTILLISYGIRRLIKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1afo-a1-m1-cB 40 40 1.0000 1.0000 1.0000 2.02e-22 1afo-a1-m1-cA_1afo-a1-m1-cB
2 1afo-a1-m1-cA 40 40 1.0000 1.0000 1.0000 2.02e-22 1afo-a1-m1-cA_1afo-a1-m1-cB
3 5eh4-a2-m1-cD 29 29 0.7000 0.9655 0.9655 1.11e-12 5eh4-a2-m1-cC_5eh4-a2-m1-cD
4 5eh4-a2-m1-cC 29 29 0.7000 0.9655 0.9655 1.11e-12 5eh4-a2-m1-cC_5eh4-a2-m1-cD
5 6yue-a1-m2-cA 227 33 0.2500 0.0441 0.3030 1.1 6yue-a1-m1-cA_6yue-a1-m2-cA
6 6yue-a1-m1-cA 227 33 0.2500 0.0441 0.3030 1.1 6yue-a1-m1-cA_6yue-a1-m2-cA
7 6w9y-a1-m1-cC 28 28 0.2250 0.3214 0.3214 7.5 6w9y-a1-m1-cA_6w9y-a1-m1-cC, 6w9y-a1-m1-cB_6w9y-a1-m1-cC
8 6w9y-a1-m1-cB 28 28 0.2250 0.3214 0.3214 7.5 6w9y-a1-m1-cB_6w9y-a1-m1-cC
9 6w9y-a1-m1-cA 28 28 0.2250 0.3214 0.3214 7.5 6w9y-a1-m1-cA_6w9y-a1-m1-cC
10 2jpq-a1-m1-cB 83 39 0.3750 0.1807 0.3846 8.3 2jpq-a1-m1-cA_2jpq-a1-m1-cB
11 2jpq-a1-m1-cA 83 39 0.3750 0.1807 0.3846 8.3 2jpq-a1-m1-cA_2jpq-a1-m1-cB
12 5zbj-a1-m2-cA 185 27 0.2500 0.0541 0.3704 9.5 5zbj-a1-m1-cA_5zbj-a1-m2-cA
13 5zbj-a1-m1-cA 185 27 0.2500 0.0541 0.3704 9.5 5zbj-a1-m1-cA_5zbj-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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