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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
VRDAYIAKPHNCVYECARNEYCNDLCTKNGAKSGYCQWVGKYGNGCWCIELPDNVPIRVP
GKCH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1djt-a1-m1-cB 64 64 1.0000 1.0000 1.0000 2.17e-43 1djt-a1-m1-cA_1djt-a1-m1-cB
2 1djt-a1-m1-cA 64 64 1.0000 1.0000 1.0000 2.17e-43 1djt-a1-m1-cA_1djt-a1-m1-cB
3 2yeo-a1-m3-cA 65 64 0.8125 0.8000 0.8125 1.03e-34 2yeo-a1-m2-cA_2yeo-a1-m3-cA
4 2yeo-a1-m2-cA 65 64 0.8125 0.8000 0.8125 1.03e-34 2yeo-a1-m2-cA_2yeo-a1-m3-cA
5 1kv0-a1-m1-cB 66 64 0.7812 0.7576 0.7812 5.94e-33 1kv0-a1-m1-cA_1kv0-a1-m1-cB
6 1kv0-a1-m1-cA 66 64 0.7812 0.7576 0.7812 5.94e-33 1kv0-a1-m1-cA_1kv0-a1-m1-cB
7 1t0z-a9-m5-cA 72 57 0.3125 0.2778 0.3509 0.043 1t0z-a9-m1-cA_1t0z-a9-m5-cA
8 1t0z-a9-m1-cA 72 57 0.3125 0.2778 0.3509 0.043 1t0z-a9-m1-cA_1t0z-a9-m5-cA
9 1t0z-a8-m3-cB 72 57 0.3125 0.2778 0.3509 0.043 1t0z-a8-m1-cA_1t0z-a8-m3-cB
10 1t0z-a8-m1-cA 72 57 0.3125 0.2778 0.3509 0.043 1t0z-a8-m1-cA_1t0z-a8-m3-cB
11 1t0z-a7-m3-cB 72 57 0.3125 0.2778 0.3509 0.043 1t0z-a7-m3-cA_1t0z-a7-m3-cB
12 1t0z-a7-m3-cA 72 57 0.3125 0.2778 0.3509 0.043 1t0z-a7-m3-cA_1t0z-a7-m3-cB
13 1x92-a1-m2-cA 194 23 0.1719 0.0567 0.4783 2.3 1x92-a1-m2-cA_1x92-a1-m2-cB
14 1x92-a1-m1-cA 194 23 0.1719 0.0567 0.4783 2.3 1x92-a1-m1-cA_1x92-a1-m2-cB
15 1x92-a1-m2-cB 197 23 0.1719 0.0558 0.4783 2.3 1x92-a1-m1-cA_1x92-a1-m2-cB, 1x92-a1-m1-cB_1x92-a1-m2-cB, 1x92-a1-m2-cA_1x92-a1-m2-cB
16 1x92-a1-m1-cB 197 23 0.1719 0.0558 0.4783 2.3 1x92-a1-m1-cB_1x92-a1-m2-cB
17 5m7r-a1-m1-cA 466 37 0.1875 0.0258 0.3243 5.3 5m7r-a1-m1-cA_5m7r-a1-m1-cB
18 5uqz-a2-m2-cA 354 25 0.1406 0.0254 0.3600 6.0 5uqz-a2-m1-cA_5uqz-a2-m2-cA
19 5uqz-a2-m1-cA 354 25 0.1406 0.0254 0.3600 6.0 5uqz-a2-m1-cA_5uqz-a2-m2-cA
20 7ou6-a1-m1-cAAA 430 37 0.1875 0.0279 0.3243 6.1 7ou6-a1-m1-cAAA_7ou6-a1-m1-cBBB
21 7ou6-a1-m1-cBBB 436 37 0.1875 0.0275 0.3243 6.1 7ou6-a1-m1-cAAA_7ou6-a1-m1-cBBB
22 5m7r-a1-m1-cB 470 37 0.1875 0.0255 0.3243 6.5 5m7r-a1-m1-cA_5m7r-a1-m1-cB
23 5uhp-a1-m1-cB 307 37 0.1719 0.0358 0.2973 6.9 5uhp-a1-m1-cA_5uhp-a1-m1-cB
24 5uhp-a1-m1-cA 307 37 0.1719 0.0358 0.2973 6.9 5uhp-a1-m1-cA_5uhp-a1-m1-cB
25 6mhl-a1-m1-cB 561 42 0.2344 0.0267 0.3571 9.3 6mhl-a1-m1-cA_6mhl-a1-m1-cB
26 6mhl-a1-m1-cA 561 42 0.2344 0.0267 0.3571 9.3 6mhl-a1-m1-cA_6mhl-a1-m1-cB
27 6p4u-a2-m2-cA 843 16 0.1406 0.0107 0.5625 9.4 6p4u-a2-m1-cA_6p4u-a2-m2-cA
28 6p4u-a2-m1-cA 843 16 0.1406 0.0107 0.5625 9.4 6p4u-a2-m1-cA_6p4u-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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