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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
VRDGYIALPHNCAYGCLNNEYCNNLCTKDGAKIGYCNIVGKYGNACWCIQLPDNVPIRVP
GRCHPA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1kv0-a1-m1-cB 66 66 1.0000 1.0000 1.0000 6.05e-44 1kv0-a1-m1-cA_1kv0-a1-m1-cB
2 1kv0-a1-m1-cA 66 66 1.0000 1.0000 1.0000 6.05e-44 1kv0-a1-m1-cA_1kv0-a1-m1-cB
3 1djt-a1-m1-cB 64 64 0.7576 0.7812 0.7812 6.13e-33 1djt-a1-m1-cA_1djt-a1-m1-cB
4 1djt-a1-m1-cA 64 64 0.7576 0.7812 0.7812 6.13e-33 1djt-a1-m1-cA_1djt-a1-m1-cB
5 2yeo-a1-m3-cA 65 64 0.6515 0.6615 0.6719 2.67e-27 2yeo-a1-m2-cA_2yeo-a1-m3-cA
6 2yeo-a1-m2-cA 65 64 0.6515 0.6615 0.6719 2.67e-27 2yeo-a1-m2-cA_2yeo-a1-m3-cA
7 1t0z-a9-m5-cA 72 57 0.3182 0.2917 0.3684 0.028 1t0z-a9-m1-cA_1t0z-a9-m5-cA
8 1t0z-a9-m1-cA 72 57 0.3182 0.2917 0.3684 0.028 1t0z-a9-m1-cA_1t0z-a9-m5-cA
9 1t0z-a8-m3-cB 72 57 0.3182 0.2917 0.3684 0.028 1t0z-a8-m1-cA_1t0z-a8-m3-cB
10 1t0z-a8-m1-cA 72 57 0.3182 0.2917 0.3684 0.028 1t0z-a8-m1-cA_1t0z-a8-m3-cB
11 1t0z-a7-m3-cB 72 57 0.3182 0.2917 0.3684 0.028 1t0z-a7-m3-cA_1t0z-a7-m3-cB
12 1t0z-a7-m3-cA 72 57 0.3182 0.2917 0.3684 0.028 1t0z-a7-m3-cA_1t0z-a7-m3-cB
13 8adn-a1-m1-cX 193 20 0.1515 0.0518 0.5000 2.2 8adn-a1-m1-cJ_8adn-a1-m1-cX
14 8adn-a1-m1-cJ 193 20 0.1515 0.0518 0.5000 2.2 8adn-a1-m1-cJ_8adn-a1-m1-cX
15 1x92-a1-m2-cB 197 26 0.1364 0.0457 0.3462 2.2 1x92-a1-m1-cA_1x92-a1-m2-cB, 1x92-a1-m1-cB_1x92-a1-m2-cB, 1x92-a1-m2-cA_1x92-a1-m2-cB
16 1x92-a1-m1-cB 197 26 0.1364 0.0457 0.3462 2.2 1x92-a1-m1-cB_1x92-a1-m2-cB
17 1x92-a1-m2-cA 194 26 0.1364 0.0464 0.3462 2.2 1x92-a1-m2-cA_1x92-a1-m2-cB
18 1x92-a1-m1-cA 194 26 0.1364 0.0464 0.3462 2.2 1x92-a1-m1-cA_1x92-a1-m2-cB
19 6mtw-a1-m1-cB 376 25 0.1667 0.0293 0.4400 6.7 6mtw-a1-m1-cA_6mtw-a1-m1-cB
20 6mtw-a1-m1-cA 376 25 0.1667 0.0293 0.4400 6.7 6mtw-a1-m1-cA_6mtw-a1-m1-cB
21 1bcg-a1-m2-cA 72 38 0.2576 0.2361 0.4474 7.2 1bcg-a1-m1-cA_1bcg-a1-m2-cA
22 1bcg-a1-m1-cA 72 38 0.2576 0.2361 0.4474 7.2 1bcg-a1-m1-cA_1bcg-a1-m2-cA
23 6p4u-a2-m2-cA 843 16 0.1364 0.0107 0.5625 7.9 6p4u-a2-m1-cA_6p4u-a2-m2-cA
24 6p4u-a2-m1-cA 843 16 0.1364 0.0107 0.5625 7.9 6p4u-a2-m1-cA_6p4u-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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