Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=81)
VRFRLDDTDKQEISKTLTSVYRSLEEKGYNPINQIIGYVLSGDPAYIPRYNDARNQIRKH
ERDEIIEELVRYYLKGNGIDL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7y86-a1-m1-cB 83 81 1.0000 0.9759 1.0000 1.26e-54 7y86-a1-m1-cA_7y86-a1-m1-cB
2 7y86-a1-m1-cA 81 81 1.0000 1.0000 1.0000 1.37e-54 7y86-a1-m1-cA_7y86-a1-m1-cB
3 5us5-a1-m1-cB 89 81 0.7284 0.6629 0.7284 3.43e-40 5us5-a1-m1-cA_5us5-a1-m1-cB
4 5us5-a1-m1-cA 89 81 0.7284 0.6629 0.7284 3.43e-40 5us5-a1-m1-cA_5us5-a1-m1-cB
5 6tif-a1-m1-cB 87 74 0.5926 0.5517 0.6486 6.23e-31 6tif-a1-m1-cA_6tif-a1-m1-cB
6 6tif-a1-m1-cA 84 74 0.5926 0.5714 0.6486 6.31e-31 6tif-a1-m1-cA_6tif-a1-m1-cB
7 4z0y-a3-m1-cD 346 38 0.1605 0.0376 0.3421 0.35 4z0y-a3-m1-cB_4z0y-a3-m1-cD
8 4z0y-a3-m1-cB 346 38 0.1605 0.0376 0.3421 0.35 4z0y-a3-m1-cB_4z0y-a3-m1-cD
9 5tf0-a1-m1-cA 706 53 0.2222 0.0255 0.3396 4.0 5tf0-a1-m1-cA_5tf0-a1-m1-cB
10 5tf0-a1-m1-cB 706 53 0.2222 0.0255 0.3396 4.3 5tf0-a1-m1-cA_5tf0-a1-m1-cB
11 1j5y-a2-m4-cA 167 52 0.2222 0.1078 0.3462 4.5 1j5y-a2-m1-cA_1j5y-a2-m4-cA, 1j5y-a2-m2-cA_1j5y-a2-m4-cA, 1j5y-a2-m3-cA_1j5y-a2-m4-cA
12 1j5y-a2-m3-cA 167 52 0.2222 0.1078 0.3462 4.5 1j5y-a2-m3-cA_1j5y-a2-m4-cA
13 1j5y-a2-m2-cA 167 52 0.2222 0.1078 0.3462 4.5 1j5y-a2-m2-cA_1j5y-a2-m4-cA
14 1j5y-a2-m1-cA 167 52 0.2222 0.1078 0.3462 4.5 1j5y-a2-m1-cA_1j5y-a2-m4-cA
15 2nnw-a2-m3-cC 350 26 0.1605 0.0371 0.5000 4.6 2nnw-a2-m1-cC_2nnw-a2-m3-cC
16 2nnw-a2-m1-cC 350 26 0.1605 0.0371 0.5000 4.6 2nnw-a2-m1-cC_2nnw-a2-m3-cC
17 4by9-a1-m1-cL 366 26 0.1605 0.0355 0.5000 4.8 4by9-a1-m1-cI_4by9-a1-m1-cL
18 4by9-a1-m1-cI 366 26 0.1605 0.0355 0.5000 4.8 4by9-a1-m1-cC_4by9-a1-m1-cI, 4by9-a1-m1-cI_4by9-a1-m1-cL
19 4by9-a1-m1-cC 366 26 0.1605 0.0355 0.5000 4.8 4by9-a1-m1-cC_4by9-a1-m1-cI
20 3zw6-a1-m1-cF 263 42 0.2099 0.0646 0.4048 5.6 3zw6-a1-m1-cE_3zw6-a1-m1-cF
21 3zw6-a1-m1-cE 263 42 0.2099 0.0646 0.4048 5.6 3zw6-a1-m1-cE_3zw6-a1-m1-cF
22 1kqf-a1-m3-cB 289 23 0.1235 0.0346 0.4348 6.5 1kqf-a1-m2-cB_1kqf-a1-m3-cB
23 1kqf-a1-m2-cB 289 23 0.1235 0.0346 0.4348 6.5 1kqf-a1-m2-cB_1kqf-a1-m3-cB
24 3ss6-a2-m1-cB 391 21 0.1235 0.0256 0.4762 6.9 3ss6-a2-m1-cB_3ss6-a2-m1-cA
25 3ss6-a1-m2-cB 391 21 0.1235 0.0256 0.4762 6.9 3ss6-a1-m1-cB_3ss6-a1-m2-cB, 3ss6-a1-m2-cB_3ss6-a1-m1-cA
26 3ss6-a1-m1-cB 391 21 0.1235 0.0256 0.4762 6.9 3ss6-a1-m1-cB_3ss6-a1-m2-cB
27 3ss6-a2-m1-cA 393 21 0.1235 0.0254 0.4762 6.9 3ss6-a2-m1-cB_3ss6-a2-m1-cA
28 3ss6-a1-m1-cA 393 21 0.1235 0.0254 0.4762 6.9 3ss6-a1-m2-cB_3ss6-a1-m1-cA
29 5n72-a1-m2-cA 387 22 0.1481 0.0310 0.5455 9.4 5n72-a1-m1-cA_5n72-a1-m2-cA
30 5n72-a1-m1-cA 387 22 0.1481 0.0310 0.5455 9.4 5n72-a1-m1-cA_5n72-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600