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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
VRPFLDVYQRSACQTRETLVSILQEHPDEISDIFRPSCVAVLRCSGCCTDESMKCTPVGK
HTADIQIMRMNPRTHSSKMEVMKFMEHTACECRPA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1wq9-a1-m1-cB 95 95 1.0000 1.0000 1.0000 1.16e-67 1wq9-a1-m1-cB_1wq9-a1-m1-cA
2 1wq9-a1-m1-cA 96 95 1.0000 0.9896 1.0000 1.27e-67 1wq9-a1-m1-cB_1wq9-a1-m1-cA
3 1wq8-a2-m8-cA 99 94 0.8737 0.8384 0.8830 5.64e-59 1wq8-a2-m3-cA_1wq8-a2-m8-cA, 1wq8-a2-m5-cA_1wq8-a2-m8-cA
4 1wq8-a2-m5-cA 99 94 0.8737 0.8384 0.8830 5.64e-59 1wq8-a2-m5-cA_1wq8-a2-m8-cA
5 1wq8-a2-m3-cA 99 94 0.8737 0.8384 0.8830 5.64e-59 1wq8-a2-m3-cA_1wq8-a2-m8-cA
6 1fzv-a1-m1-cB 100 94 0.4105 0.3900 0.4149 3.57e-24 1fzv-a1-m1-cA_1fzv-a1-m1-cB
7 1fzv-a1-m1-cA 100 94 0.4105 0.3900 0.4149 3.57e-24 1fzv-a1-m1-cA_1fzv-a1-m1-cB
8 2c7w-a1-m1-cB 95 91 0.4000 0.4000 0.4176 9.65e-22 2c7w-a1-m1-cA_2c7w-a1-m1-cB
9 2c7w-a1-m1-cA 95 91 0.4000 0.4000 0.4176 9.65e-22 2c7w-a1-m1-cA_2c7w-a1-m1-cB
10 3v6b-a1-m2-cA 94 93 0.3263 0.3298 0.3333 4.83e-18 3v6b-a1-m1-cA_3v6b-a1-m2-cA
11 3v6b-a1-m1-cA 94 93 0.3263 0.3298 0.3333 4.83e-18 3v6b-a1-m1-cA_3v6b-a1-m2-cA
12 2xv7-a1-m2-cA 104 89 0.3158 0.2885 0.3371 4.29e-14 2xv7-a1-m1-cA_2xv7-a1-m2-cA
13 2xv7-a1-m1-cA 104 89 0.3158 0.2885 0.3371 4.29e-14 2xv7-a1-m1-cA_2xv7-a1-m2-cA
14 2x1w-a1-m1-cA 98 86 0.2421 0.2347 0.2674 1.95e-10 2x1w-a1-m1-cA_2x1w-a1-m1-cB
15 2x1w-a1-m1-cB 98 86 0.2421 0.2347 0.2674 1.98e-10 2x1w-a1-m1-cA_2x1w-a1-m1-cB
16 3mjk-a3-m1-cX 121 89 0.2947 0.2314 0.3146 3.54e-07 3mjk-a3-m1-cX_3mjk-a3-m1-cY
17 3mjk-a3-m1-cY 129 89 0.2947 0.2171 0.3146 4.44e-07 3mjk-a3-m1-cX_3mjk-a3-m1-cY
18 1pdg-a2-m2-cC 86 66 0.2211 0.2442 0.3182 4.65e-06 1pdg-a2-m1-cC_1pdg-a2-m2-cC
19 1pdg-a2-m1-cC 86 66 0.2211 0.2442 0.3182 4.65e-06 1pdg-a2-m1-cC_1pdg-a2-m2-cC
20 3mjg-a2-m1-cA 97 86 0.2526 0.2474 0.2791 1.26e-05 3mjg-a2-m1-cA_3mjg-a2-m1-cB
21 3mjg-a2-m1-cB 101 86 0.2526 0.2376 0.2791 1.56e-05 3mjg-a2-m1-cA_3mjg-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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