HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=99)
VRPFLEVHERSACQARETLVPILQEYPDEISDIFRPSCVAVLRCSGCCTDESLKCTPVGK
HTVDIQIMRVNPRTQSSKMEVMKFTEHTACECRPRRKQG

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	1wq8-a2-m8-cA	99	99	1.0000	1.0000	1.0000	5.28e-70	1wq8-a2-m3-cA_1wq8-a2-m8-cA, 1wq8-a2-m5-cA_1wq8-a2-m8-cA
2	1wq8-a2-m5-cA	99	99	1.0000	1.0000	1.0000	5.28e-70	1wq8-a2-m5-cA_1wq8-a2-m8-cA
3	1wq8-a2-m3-cA	99	99	1.0000	1.0000	1.0000	5.28e-70	1wq8-a2-m3-cA_1wq8-a2-m8-cA
4	1wq9-a1-m1-cA	96	94	0.8384	0.8646	0.8830	5.25e-59	1wq9-a1-m1-cB_1wq9-a1-m1-cA
5	1wq9-a1-m1-cB	95	94	0.8384	0.8737	0.8830	5.87e-59	1wq9-a1-m1-cB_1wq9-a1-m1-cA
6	1fzv-a1-m1-cB	100	96	0.4545	0.4500	0.4688	5.89e-27	1fzv-a1-m1-cA_1fzv-a1-m1-cB
7	1fzv-a1-m1-cA	100	96	0.4545	0.4500	0.4688	5.89e-27	1fzv-a1-m1-cA_1fzv-a1-m1-cB
8	2c7w-a1-m1-cB	95	96	0.4040	0.4211	0.4167	1.88e-23	2c7w-a1-m1-cA_2c7w-a1-m1-cB
9	2c7w-a1-m1-cA	95	96	0.4040	0.4211	0.4167	1.88e-23	2c7w-a1-m1-cA_2c7w-a1-m1-cB
10	3v6b-a1-m2-cA	94	95	0.3535	0.3723	0.3684	8.39e-20	3v6b-a1-m1-cA_3v6b-a1-m2-cA
11	3v6b-a1-m1-cA	94	95	0.3535	0.3723	0.3684	8.39e-20	3v6b-a1-m1-cA_3v6b-a1-m2-cA
12	2xv7-a1-m2-cA	104	90	0.3131	0.2981	0.3444	4.42e-14	2xv7-a1-m1-cA_2xv7-a1-m2-cA
13	2xv7-a1-m1-cA	104	90	0.3131	0.2981	0.3444	4.42e-14	2xv7-a1-m1-cA_2xv7-a1-m2-cA
14	2x1w-a1-m1-cB	98	87	0.2525	0.2551	0.2874	8.72e-12	2x1w-a1-m1-cA_2x1w-a1-m1-cB
15	2x1w-a1-m1-cA	98	84	0.2525	0.2551	0.2976	1.08e-11	2x1w-a1-m1-cA_2x1w-a1-m1-cB
16	3mjk-a3-m1-cX	121	95	0.2828	0.2314	0.2947	3.80e-07	3mjk-a3-m1-cX_3mjk-a3-m1-cY
17	3mjk-a3-m1-cY	129	86	0.2525	0.1938	0.2907	1.39e-06	3mjk-a3-m1-cX_3mjk-a3-m1-cY
18	1pdg-a2-m2-cC	86	66	0.2121	0.2442	0.3182	7.83e-06	1pdg-a2-m1-cC_1pdg-a2-m2-cC
19	1pdg-a2-m1-cC	86	66	0.2121	0.2442	0.3182	7.83e-06	1pdg-a2-m1-cC_1pdg-a2-m2-cC
20	3mjg-a2-m1-cA	97	86	0.2323	0.2371	0.2674	1.01e-04	3mjg-a2-m1-cA_3mjg-a2-m1-cB
21	3mjg-a2-m1-cB	101	86	0.2323	0.2277	0.2674	1.11e-04	3mjg-a2-m1-cA_3mjg-a2-m1-cB
22	5y8q-a1-m2-cB	223	19	0.1010	0.0448	0.5263	9.3	5y8q-a1-m1-cB_5y8q-a1-m2-cB
23	5y8q-a1-m1-cB	223	19	0.1010	0.0448	0.5263	9.3	5y8q-a1-m1-cB_5y8q-a1-m2-cB
24	2ogr-a1-m1-cD	222	19	0.1010	0.0450	0.5263	9.6	2ogr-a1-m1-cB_2ogr-a1-m1-cD
25	2ogr-a1-m1-cB	222	19	0.1010	0.0450	0.5263	9.6	2ogr-a1-m1-cB_2ogr-a1-m1-cD

[Back]

Reference:
Jacob Schwartz et al.