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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
VRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCF
VRVENVKGAVWTVDEVEYQKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2a07-a1-m1-cI 81 81 1.0000 1.0000 1.0000 2.99e-57 2a07-a1-m1-cH_2a07-a1-m1-cI
2 2a07-a1-m1-cH 79 78 0.9630 0.9873 1.0000 1.05e-54 2a07-a1-m1-cH_2a07-a1-m1-cI
3 6xat-a2-m2-cA 77 75 0.8395 0.8831 0.9067 3.74e-48 6xat-a2-m1-cA_6xat-a2-m2-cA
4 6xat-a2-m1-cA 77 75 0.8395 0.8831 0.9067 3.74e-48 6xat-a2-m1-cA_6xat-a2-m2-cA
5 3qrf-a2-m1-cI 82 81 0.7407 0.7317 0.7407 7.44e-43 3qrf-a2-m1-cH_3qrf-a2-m1-cI
6 3qrf-a2-m1-cH 82 81 0.7407 0.7317 0.7407 7.44e-43 3qrf-a2-m1-cH_3qrf-a2-m1-cI
7 7vox-a2-m1-cB 83 78 0.3951 0.3855 0.4103 1.91e-20 7vox-a2-m1-cB_7vox-a2-m1-cH
8 7vox-a2-m1-cH 85 78 0.3951 0.3765 0.4103 2.10e-20 7vox-a2-m1-cB_7vox-a2-m1-cH
9 7fj2-a2-m1-cE 79 75 0.4074 0.4177 0.4400 1.02e-17 7fj2-a2-m1-cE_7fj2-a2-m1-cF
10 7fj2-a2-m1-cF 80 75 0.4074 0.4125 0.4400 1.12e-17 7fj2-a2-m1-cE_7fj2-a2-m1-cF
11 3k4l-a1-m2-cB 567 27 0.1235 0.0176 0.3704 1.1 3k4l-a1-m1-cB_3k4l-a1-m2-cB, 3k4l-a1-m2-cA_3k4l-a1-m2-cB
12 3k4l-a1-m2-cA 567 27 0.1235 0.0176 0.3704 1.1 3k4l-a1-m2-cA_3k4l-a1-m2-cB
13 3k4l-a1-m1-cB 567 27 0.1235 0.0176 0.3704 1.1 3k4l-a1-m1-cB_3k4l-a1-m2-cB
14 3pl8-a1-m4-cA 573 27 0.1235 0.0175 0.3704 1.1 3pl8-a1-m2-cA_3pl8-a1-m4-cA
15 3pl8-a1-m2-cA 573 27 0.1235 0.0175 0.3704 1.1 3pl8-a1-m2-cA_3pl8-a1-m4-cA
16 3pxp-a5-m2-cC 278 42 0.1605 0.0468 0.3095 4.4 3pxp-a5-m1-cC_3pxp-a5-m2-cC
17 3pxp-a5-m1-cC 278 42 0.1605 0.0468 0.3095 4.4 3pxp-a5-m1-cC_3pxp-a5-m2-cC

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Reference:
Jacob Schwartz et al.

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