Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=81)
VRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCF
VRVENVKGAVWTVDEVEYQKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2a07-a1-m1-cI 81 81 1.0000 1.0000 1.0000 2.99e-57 2a07-a1-m1-cH_2a07-a1-m1-cI
2 2a07-a1-m1-cH 79 78 0.9630 0.9873 1.0000 1.05e-54 2a07-a1-m1-cH_2a07-a1-m1-cI
3 6xat-a2-m2-cA 77 75 0.8395 0.8831 0.9067 3.74e-48 6xat-a2-m1-cA_6xat-a2-m2-cA
4 6xat-a2-m1-cA 77 75 0.8395 0.8831 0.9067 3.74e-48 6xat-a2-m1-cA_6xat-a2-m2-cA
5 3qrf-a2-m1-cI 82 81 0.7407 0.7317 0.7407 7.44e-43 3qrf-a2-m1-cH_3qrf-a2-m1-cI
6 3qrf-a2-m1-cH 82 81 0.7407 0.7317 0.7407 7.44e-43 3qrf-a2-m1-cH_3qrf-a2-m1-cI
7 7vox-a2-m1-cB 83 78 0.3951 0.3855 0.4103 1.91e-20 7vox-a2-m1-cB_7vox-a2-m1-cH
8 7vox-a2-m1-cH 85 78 0.3951 0.3765 0.4103 2.10e-20 7vox-a2-m1-cB_7vox-a2-m1-cH
9 7fj2-a2-m1-cE 79 75 0.4074 0.4177 0.4400 1.02e-17 7fj2-a2-m1-cE_7fj2-a2-m1-cF
10 7fj2-a2-m1-cF 80 75 0.4074 0.4125 0.4400 1.12e-17 7fj2-a2-m1-cE_7fj2-a2-m1-cF
11 3k4l-a1-m2-cB 567 27 0.1235 0.0176 0.3704 1.1 3k4l-a1-m1-cB_3k4l-a1-m2-cB, 3k4l-a1-m2-cA_3k4l-a1-m2-cB
12 3k4l-a1-m2-cA 567 27 0.1235 0.0176 0.3704 1.1 3k4l-a1-m2-cA_3k4l-a1-m2-cB
13 3k4l-a1-m1-cB 567 27 0.1235 0.0176 0.3704 1.1 3k4l-a1-m1-cB_3k4l-a1-m2-cB
14 3pl8-a1-m4-cA 573 27 0.1235 0.0175 0.3704 1.1 3pl8-a1-m2-cA_3pl8-a1-m4-cA
15 3pl8-a1-m2-cA 573 27 0.1235 0.0175 0.3704 1.1 3pl8-a1-m2-cA_3pl8-a1-m4-cA
16 3pxp-a5-m2-cC 278 42 0.1605 0.0468 0.3095 4.4 3pxp-a5-m1-cC_3pxp-a5-m2-cC
17 3pxp-a5-m1-cC 278 42 0.1605 0.0468 0.3095 4.4 3pxp-a5-m1-cC_3pxp-a5-m2-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600