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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
VRTCLPCGPGGKGRCFGPSICCGDELGCFVGTAEALRCQEENYLPSPCQSGQKPCGSGGR
CAAAGICCSPDGCHEDPACDP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hnu-a2-m1-cD 81 81 1.0000 1.0000 1.0000 4.24e-52 2hnu-a2-m1-cC_2hnu-a2-m1-cD
2 2hnu-a2-m1-cC 81 81 1.0000 1.0000 1.0000 4.24e-52 2hnu-a2-m1-cC_2hnu-a2-m1-cD
3 1npo-a2-m2-cA 81 79 0.8519 0.8519 0.8734 1.92e-43 1npo-a2-m1-cA_1npo-a2-m2-cA
4 1npo-a2-m1-cA 81 79 0.8519 0.8519 0.8734 1.92e-43 1npo-a2-m1-cA_1npo-a2-m2-cA, 1npo-a2-m4-cC_1npo-a2-m1-cA
5 1jk4-a1-m2-cA 79 79 0.8519 0.8734 0.8734 2.63e-43 1jk4-a1-m1-cA_1jk4-a1-m2-cA
6 1jk4-a1-m1-cA 79 79 0.8519 0.8734 0.8734 2.63e-43 1jk4-a1-m1-cA_1jk4-a1-m2-cA
7 1npo-a2-m4-cC 79 79 0.8395 0.8608 0.8608 1.52e-42 1npo-a2-m4-cC_1npo-a2-m1-cA
8 1zmb-a3-m1-cF 274 52 0.1975 0.0584 0.3077 4.5 1zmb-a3-m1-cE_1zmb-a3-m1-cF
9 1zmb-a3-m1-cE 274 52 0.1975 0.0584 0.3077 4.5 1zmb-a3-m1-cE_1zmb-a3-m1-cF
10 7l32-a2-m1-cC 140 35 0.1481 0.0857 0.3429 5.3 7l32-a2-m1-cC_7l32-a2-m1-cB
11 4bjh-a1-m6-cA 422 33 0.1605 0.0308 0.3939 5.4 4bjh-a1-m2-cA_4bjh-a1-m6-cA, 4bjh-a1-m3-cA_4bjh-a1-m6-cA
12 4bjh-a1-m3-cA 422 33 0.1605 0.0308 0.3939 5.4 4bjh-a1-m3-cA_4bjh-a1-m6-cA
13 4bjh-a1-m2-cA 422 33 0.1605 0.0308 0.3939 5.4 4bjh-a1-m2-cA_4bjh-a1-m6-cA

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Reference:
Jacob Schwartz et al.

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