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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=73)
VSDTSKLRNELRLLKEDAATFSSLRAFAARCEEYVTQVDDLNRQLEAAEEEKKTLNQLLR
LAVQQKLALTQRL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4bl6-a1-m1-cA 78 73 1.0000 0.9359 1.0000 1.16e-45 4bl6-a1-m1-cA_4bl6-a1-m1-cD, 4bl6-a1-m1-cB_4bl6-a1-m1-cA
2 4bl6-a1-m1-cD 81 73 1.0000 0.9012 1.0000 1.33e-45 4bl6-a1-m1-cA_4bl6-a1-m1-cD, 4bl6-a1-m1-cB_4bl6-a1-m1-cD
3 4bl6-a1-m1-cB 73 73 1.0000 1.0000 1.0000 1.39e-45 4bl6-a1-m1-cB_4bl6-a1-m1-cA, 4bl6-a1-m1-cB_4bl6-a1-m1-cD
4 6ofp-a1-m1-cA 91 69 0.7397 0.5934 0.7826 3.14e-32 6ofp-a1-m1-cA_6ofp-a1-m1-cB
5 6ofp-a1-m1-cB 92 69 0.7397 0.5870 0.7826 3.16e-32 6ofp-a1-m1-cA_6ofp-a1-m1-cB
6 6guw-a1-m2-cA 118 57 0.1918 0.1186 0.2456 0.72 6guw-a1-m1-cA_6guw-a1-m2-cA
7 6guw-a1-m1-cA 118 57 0.1918 0.1186 0.2456 0.72 6guw-a1-m1-cA_6guw-a1-m2-cA
8 8d38-a1-m2-cB 241 49 0.1781 0.0539 0.2653 2.5 8d38-a1-m2-cC_8d38-a1-m2-cB
9 8d38-a1-m2-cC 239 49 0.1781 0.0544 0.2653 6.3 8d38-a1-m1-cC_8d38-a1-m2-cC, 8d38-a1-m2-cC_8d38-a1-m2-cB
10 8d38-a1-m1-cC 239 49 0.1781 0.0544 0.2653 6.3 8d38-a1-m1-cC_8d38-a1-m2-cC

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Reference:
Jacob Schwartz et al.

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