Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
VSDVPRDIEVVAVTPTSALISWDAPAVTIRYIRLTYGETGGNSPVQEITLPGSKSTYTIS
GLKPGTDYTVTLYSVTGRGDSPASSKPASINFRTEI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ck2-a1-m1-cB 96 96 1.0000 1.0000 1.0000 4.72e-64 2ck2-a1-m1-cA_2ck2-a1-m1-cB
2 2ck2-a1-m1-cA 94 96 0.9792 1.0000 0.9792 1.34e-60 2ck2-a1-m1-cA_2ck2-a1-m1-cB
3 6bqo-a2-m2-cC 95 96 0.5938 0.6000 0.5938 1.75e-30 6bqo-a2-m1-cC_6bqo-a2-m2-cC
4 6bqo-a2-m1-cC 95 96 0.5938 0.6000 0.5938 1.75e-30 6bqo-a2-m1-cC_6bqo-a2-m2-cC
5 4lpu-a1-m1-cB 93 90 0.3438 0.3548 0.3667 2.60e-11 4lpu-a1-m1-cA_4lpu-a1-m1-cB
6 4lpu-a1-m1-cA 93 90 0.3438 0.3548 0.3667 2.60e-11 4lpu-a1-m1-cA_4lpu-a1-m1-cB
7 2rbl-a1-m1-cB 89 92 0.3854 0.4157 0.4022 6.86e-11 2rbl-a1-m1-cA_2rbl-a1-m1-cB
8 2rbl-a1-m1-cA 89 92 0.3854 0.4157 0.4022 6.86e-11 2rbl-a1-m1-cA_2rbl-a1-m1-cB
9 5j7k-a2-m1-cB 90 72 0.3021 0.3222 0.4028 3.96e-07 5j7k-a2-m1-cF_5j7k-a2-m1-cB
10 3t1w-a1-m2-cA 368 80 0.2604 0.0679 0.3125 4.29e-07 3t1w-a1-m1-cA_3t1w-a1-m2-cA
11 3t1w-a1-m2-cA 368 84 0.2604 0.0679 0.2976 0.005 3t1w-a1-m1-cA_3t1w-a1-m2-cA
12 3t1w-a1-m2-cA 368 78 0.1875 0.0489 0.2308 0.032 3t1w-a1-m1-cA_3t1w-a1-m2-cA
13 3t1w-a1-m1-cA 368 80 0.2604 0.0679 0.3125 4.29e-07 3t1w-a1-m1-cA_3t1w-a1-m2-cA
14 3t1w-a1-m1-cA 368 84 0.2604 0.0679 0.2976 0.005 3t1w-a1-m1-cA_3t1w-a1-m2-cA
15 3t1w-a1-m1-cA 368 78 0.1875 0.0489 0.2308 0.032 3t1w-a1-m1-cA_3t1w-a1-m2-cA
16 5j7k-a1-m1-cA 84 70 0.2917 0.3333 0.4000 7.50e-07 5j7k-a1-m1-cC_5j7k-a1-m1-cA
17 5j7k-a2-m1-cF 79 71 0.2917 0.3544 0.3944 7.52e-07 5j7k-a2-m1-cF_5j7k-a2-m1-cB
18 3b83-a1-m2-cA 95 90 0.2812 0.2842 0.3000 8.42e-07 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m8-cB_3b83-a1-m2-cA
19 3b83-a5-m1-cH 94 90 0.2812 0.2872 0.3000 8.53e-07 3b83-a5-m1-cD_3b83-a5-m1-cH
20 3b83-a1-m8-cH 94 90 0.2812 0.2872 0.3000 8.53e-07 3b83-a1-m5-cD_3b83-a1-m8-cH
21 3b83-a1-m8-cG 99 90 0.2812 0.2727 0.3000 8.63e-07 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m2-cE_3b83-a1-m8-cG
22 3b83-a1-m4-cE 99 90 0.2812 0.2727 0.3000 8.63e-07 3b83-a1-m1-cC_3b83-a1-m4-cE, 3b83-a1-m4-cC_3b83-a1-m4-cE, 3b83-a1-m4-cF_3b83-a1-m4-cE
23 3b83-a1-m4-cC 99 90 0.2812 0.2727 0.3000 8.63e-07 3b83-a1-m4-cC_3b83-a1-m4-cE
24 3b83-a1-m2-cE 99 90 0.2812 0.2727 0.3000 8.63e-07 3b83-a1-m2-cE_3b83-a1-m8-cG
25 3b83-a1-m1-cC 99 90 0.2812 0.2727 0.3000 8.63e-07 3b83-a1-m1-cC_3b83-a1-m4-cE
26 3b83-a1-m8-cB 92 90 0.2812 0.2935 0.3000 9.22e-07 3b83-a1-m8-cB_3b83-a1-m2-cA, 3b83-a1-m8-cD_3b83-a1-m8-cB
27 3b83-a1-m4-cF 92 90 0.2812 0.2935 0.3000 9.22e-07 3b83-a1-m4-cF_3b83-a1-m4-cE
28 5j7k-a2-m1-cG 85 70 0.2917 0.3294 0.4000 9.91e-07 5j7k-a2-m1-cD_5j7k-a2-m1-cG
29 3b83-a5-m1-cD 91 90 0.2812 0.2967 0.3000 1.01e-06 3b83-a5-m1-cD_3b83-a5-m1-cH
30 3b83-a1-m8-cD 91 90 0.2812 0.2967 0.3000 1.01e-06 3b83-a1-m8-cD_3b83-a1-m8-cB
31 3b83-a1-m5-cD 91 90 0.2812 0.2967 0.3000 1.01e-06 3b83-a1-m5-cD_3b83-a1-m8-cH
32 5j7k-a1-m1-cC 78 69 0.2708 0.3333 0.3768 1.10e-05 5j7k-a1-m1-cC_5j7k-a1-m1-cA
33 7y8s-a1-m1-cA 275 68 0.2083 0.0727 0.2941 3.23e-04 7y8s-a1-m1-cA_7y8s-a1-m1-cB
34 7y8s-a1-m1-cA 275 91 0.2292 0.0800 0.2418 1.5 7y8s-a1-m1-cA_7y8s-a1-m1-cB
35 7y8s-a1-m1-cB 288 70 0.2083 0.0694 0.2857 6.99e-04 7y8s-a1-m1-cA_7y8s-a1-m1-cB
36 7y8s-a1-m1-cB 288 91 0.2292 0.0764 0.2418 1.5 7y8s-a1-m1-cA_7y8s-a1-m1-cB
37 5fn8-a2-m3-cA 178 89 0.2500 0.1348 0.2697 0.044 5fn8-a2-m1-cA_5fn8-a2-m3-cA
38 5fn8-a2-m1-cA 178 89 0.2500 0.1348 0.2697 0.044 5fn8-a2-m1-cA_5fn8-a2-m3-cA
39 2v5y-a1-m2-cA 564 45 0.1667 0.0284 0.3556 0.19 2v5y-a1-m1-cA_2v5y-a1-m2-cA
40 2v5y-a1-m1-cA 564 45 0.1667 0.0284 0.3556 0.19 2v5y-a1-m1-cA_2v5y-a1-m2-cA
41 4yfg-a1-m1-cB 481 93 0.2812 0.0561 0.2903 0.21 4yfg-a1-m1-cA_4yfg-a1-m1-cB
42 4yfg-a1-m1-cB 481 78 0.2604 0.0520 0.3205 0.36 4yfg-a1-m1-cA_4yfg-a1-m1-cB
43 4yfg-a1-m1-cA 481 93 0.2812 0.0561 0.2903 0.21 4yfg-a1-m1-cA_4yfg-a1-m1-cB
44 4yfg-a1-m1-cA 481 78 0.2604 0.0520 0.3205 0.36 4yfg-a1-m1-cA_4yfg-a1-m1-cB
45 5j7k-a2-m1-cD 54 15 0.0938 0.1667 0.6000 1.1 5j7k-a2-m1-cD_5j7k-a2-m1-cG
46 2vkw-a1-m1-cA 197 38 0.1667 0.0812 0.4211 1.4 2vkw-a1-m1-cB_2vkw-a1-m1-cA
47 2vkx-a2-m1-cD 198 38 0.1667 0.0808 0.4211 1.4 2vkx-a2-m1-cC_2vkx-a2-m1-cD
48 2vkx-a2-m1-cC 198 38 0.1667 0.0808 0.4211 1.4 2vkx-a2-m1-cC_2vkx-a2-m1-cD
49 2vkw-a1-m1-cB 195 38 0.1667 0.0821 0.4211 1.5 2vkw-a1-m1-cB_2vkw-a1-m1-cA
50 3mtr-a1-m1-cB 197 103 0.3125 0.1523 0.2913 1.7 3mtr-a1-m1-cA_3mtr-a1-m1-cB
51 3mtr-a1-m1-cA 197 103 0.3125 0.1523 0.2913 1.8 3mtr-a1-m1-cA_3mtr-a1-m1-cB
52 5x83-a1-m1-cD 195 78 0.2188 0.1077 0.2692 2.3 5x83-a1-m1-cD_5x83-a1-m1-cB
53 4lsd-a2-m1-cD 93 90 0.2188 0.2258 0.2333 2.5 4lsd-a2-m1-cC_4lsd-a2-m1-cD
54 4lsd-a2-m1-cC 93 90 0.2188 0.2258 0.2333 2.5 4lsd-a2-m1-cC_4lsd-a2-m1-cD
55 6oe2-a1-m2-cA 160 38 0.1458 0.0875 0.3684 2.6 6oe2-a1-m1-cA_6oe2-a1-m2-cA
56 6oe2-a1-m1-cA 160 38 0.1458 0.0875 0.3684 2.6 6oe2-a1-m1-cA_6oe2-a1-m2-cA
57 5x83-a1-m1-cB 202 79 0.2083 0.0990 0.2532 8.2 5x83-a1-m1-cD_5x83-a1-m1-cB
58 7pmy-a1-m1-cA 657 41 0.1562 0.0228 0.3659 8.4 7pmy-a1-m1-cB_7pmy-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600