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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
VSGQAQLEQLASVAAGARYLKNKCNRSDLPADEAINRAAINVGKKRGWANIDANLLSQRS
AQLYQQLQQDSTPEATKCSQFNRQLAPFIDSLR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4a56-a1-m2-cA 93 93 1.0000 1.0000 1.0000 7.18e-64 4a56-a1-m1-cA_4a56-a1-m2-cA
2 4a56-a1-m1-cA 93 93 1.0000 1.0000 1.0000 7.18e-64 4a56-a1-m1-cA_4a56-a1-m2-cA
3 4k0u-a1-m2-cA 95 93 0.4624 0.4526 0.4624 1.55e-26 4k0u-a1-m1-cA_4k0u-a1-m2-cA
4 4k0u-a1-m1-cA 95 93 0.4624 0.4526 0.4624 1.55e-26 4k0u-a1-m1-cA_4k0u-a1-m2-cA
5 3na8-a1-m1-cD 284 49 0.1720 0.0563 0.3265 3.4 3na8-a1-m1-cD_3na8-a1-m1-cA, 3na8-a1-m1-cD_3na8-a1-m1-cC
6 3na8-a1-m1-cC 285 49 0.1720 0.0561 0.3265 3.6 3na8-a1-m1-cD_3na8-a1-m1-cC
7 3na8-a1-m1-cA 285 49 0.1720 0.0561 0.3265 3.6 3na8-a1-m1-cD_3na8-a1-m1-cA
8 3sll-a1-m1-cF 260 48 0.1613 0.0577 0.3125 7.2 3sll-a1-m1-cC_3sll-a1-m1-cF, 3sll-a1-m1-cF_3sll-a1-m1-cB
9 3sll-a1-m1-cC 258 48 0.1613 0.0581 0.3125 7.3 3sll-a1-m1-cC_3sll-a1-m1-cF
10 3sll-a1-m1-cB 263 48 0.1613 0.0570 0.3125 7.3 3sll-a1-m1-cA_3sll-a1-m1-cB, 3sll-a1-m1-cF_3sll-a1-m1-cB
11 3sll-a1-m1-cA 262 48 0.1613 0.0573 0.3125 7.7 3sll-a1-m1-cA_3sll-a1-m1-cB
12 5k3j-a1-m1-cB 659 69 0.1613 0.0228 0.2174 8.2 5k3j-a1-m1-cB_5k3j-a1-m1-cA
13 5k3j-a1-m1-cA 662 69 0.1613 0.0227 0.2174 8.4 5k3j-a1-m1-cB_5k3j-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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