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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
VSIKKSSGLNFDNTAIAINAGKGLEFDTNTSESPDINPIKTKIGSGIDYNENGAMITKLG
AGLSFDNSGAITIIPEAPRDGQAYVRKDGEWVLLSTFL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1v1i-a1-m1-cC 98 98 1.0000 1.0000 1.0000 3.13e-67 1v1i-a1-m1-cC_1v1i-a1-m1-cA, 1v1i-a1-m1-cC_1v1i-a1-m1-cB
2 1v1i-a1-m1-cB 100 100 1.0000 0.9800 0.9800 5.55e-65 1v1i-a1-m1-cC_1v1i-a1-m1-cB
3 1v1h-a2-m1-cF 101 101 1.0000 0.9703 0.9703 7.30e-65 1v1h-a2-m1-cF_1v1h-a2-m1-cE
4 1v1h-a2-m1-cD 101 101 1.0000 0.9703 0.9703 7.30e-65 1v1h-a2-m1-cD_1v1h-a2-m1-cE
5 1v1i-a1-m1-cA 102 102 1.0000 0.9608 0.9608 1.18e-64 1v1i-a1-m1-cC_1v1i-a1-m1-cA
6 1v1h-a2-m1-cE 103 103 1.0000 0.9515 0.9515 1.55e-64 1v1h-a2-m1-cD_1v1h-a2-m1-cE, 1v1h-a2-m1-cF_1v1h-a2-m1-cE
7 2m7w-a1-m1-cC 59 25 0.2551 0.4237 1.0000 1.04e-12 2m7w-a1-m1-cB_2m7w-a1-m1-cC
8 2m7w-a1-m1-cB 59 25 0.2551 0.4237 1.0000 1.04e-12 2m7w-a1-m1-cB_2m7w-a1-m1-cC
9 2lp7-a1-m1-cC 59 25 0.2551 0.4237 1.0000 1.04e-12 2lp7-a1-m1-cA_2lp7-a1-m1-cC
10 2lp7-a1-m1-cA 59 25 0.2551 0.4237 1.0000 1.04e-12 2lp7-a1-m1-cA_2lp7-a1-m1-cC
11 2ibl-a1-m3-cA 108 25 0.2551 0.2315 1.0000 2.14e-12 2ibl-a1-m2-cA_2ibl-a1-m3-cA
12 2ibl-a1-m2-cA 108 25 0.2551 0.2315 1.0000 2.14e-12 2ibl-a1-m2-cA_2ibl-a1-m3-cA
13 3j2o-a1-m1-cC 362 25 0.2449 0.0663 0.9600 1.09e-11 3j2o-a1-m1-cA_3j2o-a1-m1-cC, 3j2o-a1-m1-cB_3j2o-a1-m1-cC
14 3j2o-a1-m1-cB 362 25 0.2449 0.0663 0.9600 1.09e-11 3j2o-a1-m1-cA_3j2o-a1-m1-cB, 3j2o-a1-m1-cB_3j2o-a1-m1-cC
15 3j2o-a1-m1-cA 362 25 0.2449 0.0663 0.9600 1.09e-11 3j2o-a1-m1-cA_3j2o-a1-m1-cB, 3j2o-a1-m1-cA_3j2o-a1-m1-cC
16 2bsg-a1-m1-cC 363 25 0.2449 0.0661 0.9600 1.10e-11 2bsg-a1-m1-cA_2bsg-a1-m1-cC, 2bsg-a1-m1-cB_2bsg-a1-m1-cC
17 2bsg-a1-m1-cB 363 25 0.2449 0.0661 0.9600 1.10e-11 2bsg-a1-m1-cA_2bsg-a1-m1-cB, 2bsg-a1-m1-cB_2bsg-a1-m1-cC
18 2bsg-a1-m1-cA 363 25 0.2449 0.0661 0.9600 1.10e-11 2bsg-a1-m1-cA_2bsg-a1-m1-cB, 2bsg-a1-m1-cA_2bsg-a1-m1-cC
19 3a1m-a1-m1-cC 111 67 0.3163 0.2793 0.4627 1.50e-10 3a1m-a1-m1-cC_3a1m-a1-m1-cA, 3a1m-a1-m1-cF_3a1m-a1-m1-cC
20 3a1m-a1-m1-cA 112 67 0.3163 0.2768 0.4627 1.53e-10 3a1m-a1-m1-cC_3a1m-a1-m1-cA
21 2ww6-a1-m1-cB 25 25 0.2347 0.9200 0.9200 4.08e-08 2ww6-a1-m1-cA_2ww6-a1-m1-cB
22 2ww6-a1-m1-cA 25 25 0.2347 0.9200 0.9200 4.08e-08 2ww6-a1-m1-cA_2ww6-a1-m1-cB
23 5z87-a1-m1-cB 755 57 0.1939 0.0252 0.3333 0.28 5z87-a1-m1-cB_5z87-a1-m1-cA
24 5z87-a1-m1-cA 756 57 0.1939 0.0251 0.3333 0.28 5z87-a1-m1-cB_5z87-a1-m1-cA
25 4tsy-a1-m2-cD 176 70 0.2143 0.1193 0.3000 3.6 4tsy-a1-m2-cC_4tsy-a1-m2-cD
26 4tsy-a1-m2-cC 176 70 0.2143 0.1193 0.3000 3.6 4tsy-a1-m2-cC_4tsy-a1-m2-cD
27 5v5v-a1-m1-cB 527 35 0.1224 0.0228 0.3429 4.3 5v5v-a1-m1-cA_5v5v-a1-m1-cB
28 5v5v-a1-m1-cA 527 35 0.1224 0.0228 0.3429 4.3 5v5v-a1-m1-cA_5v5v-a1-m1-cB
29 6zur-a1-m1-cB 398 23 0.1122 0.0276 0.4783 6.0 6zur-a1-m1-cA_6zur-a1-m1-cB
30 6zur-a1-m1-cA 398 23 0.1122 0.0276 0.4783 6.0 6zur-a1-m1-cA_6zur-a1-m1-cB
31 4mqd-a4-m1-cC 128 48 0.1531 0.1172 0.3125 7.4 4mqd-a4-m1-cC_4mqd-a4-m3-cD
32 4mqd-a2-m1-cC 128 48 0.1531 0.1172 0.3125 7.4 4mqd-a2-m1-cC_4mqd-a2-m1-cD
33 4mqd-a4-m3-cD 129 48 0.1531 0.1163 0.3125 7.5 4mqd-a4-m1-cC_4mqd-a4-m3-cD
34 4mqd-a2-m1-cD 129 48 0.1531 0.1163 0.3125 7.5 4mqd-a2-m1-cC_4mqd-a2-m1-cD
35 2x5q-a1-m1-cA 183 32 0.1224 0.0656 0.3750 7.5 2x5q-a1-m1-cB_2x5q-a1-m1-cA
36 2x5q-a1-m1-cB 180 32 0.1224 0.0667 0.3750 8.0 2x5q-a1-m1-cB_2x5q-a1-m1-cA
37 4q2k-a2-m1-cC 234 57 0.1837 0.0769 0.3158 9.0 4q2k-a2-m1-cB_4q2k-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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