Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
VSKIRVGTQQQVAYALGTPLSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNI
DNKP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yh9-a1-m2-cB 66 64 1.0000 0.9697 1.0000 1.03e-42 2yh9-a1-m2-cA_2yh9-a1-m2-cB, 2yh9-a1-m2-cC_2yh9-a1-m2-cB
2 2yh9-a1-m2-cC 65 64 1.0000 0.9846 1.0000 1.15e-42 2yh9-a1-m2-cA_2yh9-a1-m2-cC, 2yh9-a1-m2-cC_2yh9-a1-m2-cB
3 2yh9-a1-m2-cA 64 64 1.0000 1.0000 1.0000 1.45e-42 2yh9-a1-m2-cA_2yh9-a1-m2-cB, 2yh9-a1-m2-cA_2yh9-a1-m2-cC
4 7jrk-a1-m1-cB 88 63 0.3438 0.2500 0.3492 5.87e-06 7jrk-a1-m1-cA_7jrk-a1-m1-cB
5 7jrk-a1-m1-cA 88 63 0.3438 0.2500 0.3492 5.87e-06 7jrk-a1-m1-cA_7jrk-a1-m1-cB
6 7rhs-a1-m1-cB 453 41 0.1875 0.0265 0.2927 3.6 7rhs-a1-m1-cB_7rhs-a1-m1-cC
7 7rhs-a1-m1-cC 454 41 0.1875 0.0264 0.2927 3.6 7rhs-a1-m1-cB_7rhs-a1-m1-cC
8 3o0y-a4-m1-cC 585 16 0.1562 0.0171 0.6250 6.0 3o0y-a4-m1-cB_3o0y-a4-m1-cC
9 3o0y-a4-m1-cB 585 16 0.1562 0.0171 0.6250 6.0 3o0y-a4-m1-cB_3o0y-a4-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600